Anoxybacillus gonensis: AFK25_00570
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Entry
AFK25_00570 CDS
T04000
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
agn
Anoxybacillus gonensis
Pathway
agn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFK25_00570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agn03021
]
AFK25_00570
03400 DNA repair and recombination proteins [BR:
agn03400
]
AFK25_00570
Enzymes [BR:
agn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFK25_00570
Transcription machinery [BR:
agn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFK25_00570
DNA repair and recombination proteins [BR:
agn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFK25_00570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKS37107
LinkDB
All DBs
Position
110802..114401
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNKFEYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTPLEKKQLLSEKEYRAYREKYGNSFQASMGAEAIKKLLQ
DIDLEKEVETLKEELKTAQGQRRARTIKRLEVLEAFRNSGNDPSWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVHPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREGAVGEGMVFKDTDEALLAYHNGYVHLHTRIAVH
AGSLKNETFTEEQNNKLLVTTVGKLIFNEILPKSFPYINEPTQENIEERTPDKYFLDKGV
NVKEEIRKRELVPPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITIGV
ADIVVLPEKQEILEEAQAKVDTVLKQFRRGLITDEERYERVISIWSAAKDKIQGRLMESL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGTLIRALKDGTEVIVKLE
ERLVGRYARKTVKHPETGEVLVRENEMITEDIANAIVKAGIEEVWIRSAFTCNTRHGVCK
KCYGRNLATGAEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQELF
EARNPKGQAVISEIDGVVVAINETRDRQRELVIQGEVETRTYTAPYSARLKVQEGQKVER
GQELTEGSIDPKELLRVKDMNAVQEYLLREVQKVYRMQGVEISDKHIEVMVRQMLRKVRV
IDAGDTDLLPGTLLDIHQFTDANAKVLMEGKRPATARPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMARYRKVKPVIKTKKDEDAVTTK
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgtaaataagtttgaatatatgaagatcggactcgcttcacccgagaaaatt
cgttcttggtcgtatggtgaagttaaaaaaccagaaacgattaactatcgaacattaaaa
cctgaaaaagatggtctgttttgcgaacgcatttttggtccgacaaaagactgggaatgt
cattgcggaaaatataagcgcgttcgttataaaggtgtcgtttgtgaccgatgcggtgtt
gaagtgacacgtgcaaaagttcgccgtgagcgcatgggtcatattgaactagcagcccct
gtttcacatatttggtactttaaaggaattcctagccgcatgggacttgtcttagacatg
tcccctcgtgcgctagaagaagtcatttactttgcatcttacgtcgtgaccgatccaggc
gatacgccattagaaaagaaacaattgctttctgaaaaagagtatcgtgcatatcgcgag
aagtacggaaattcattccaagcttcaatgggtgcagaggcaattaaaaaactgttacaa
gatatcgatcttgaaaaagaagtagagacgttaaaagaagagctaaaaacagcacaagga
caacgtcgtgctcgcacgattaaacgtctcgaagtgctcgaagcgttccgtaactctggt
aacgacccatcgtggatggtgttagatgtgcttccggttattccgccggagttgcgcccg
atggtacagttagatggcggacgttttgcgacatctgacttaaacgacttatatcgtcga
gtcattaaccggaacaaccgtttaaagcgtctattagaccttggagcgccgaacattatt
gttcaaaacgaaaaacgaatgcttcaagaagcggttgatgcgctaattgataacggtcgt
cgtggccgcccggtcacagggccaggaaaccgtccgcttaaatcgctttctcatatgtta
aaaggaaagcaaggtcgtttccgtcaaaacttgctcggtaagcgcgttgactattctggt
cgttcggtaatcgttgtcggcccgaacttaaaaatgtatcaatgcggcttgccaaaagaa
atggcgcttgaattgtttaagccgtttgttatgaaagaattagtagaacgtggcttagcg
cacaacattaaaagcgcgaagcggaaaattgagcgcgttcacccagaagtttgggatgtt
ttagagtctgtcattaaagaacatccagtgctattaaaccgtgcaccaacgcttcaccgt
cttggtattcaagcgtttgagccgacgcttgtagaaggtcgtgcaatccgcttgcatccg
cttgtatgtactgcttataacgcagactttgacggcgaccaaatggctgtgcacgtaccg
ctttcggcagaggcacaagctgaggcacgtctacttatgcttgcggcgcaaaatatttta
aacccgaaagacggaaaaccagttgttactccttcgcaagacatggttttaggaaactac
tatttaacgatggaacgtgaaggtgcagtcggcgaaggaatggtgtttaaagatacggat
gaggcgttgctggcttaccataacggttatgttcatctgcatacacgtattgcggttcat
gcaggttcgctgaaaaacgaaacgtttacagaagaacaaaataataagttgcttgtaacg
actgtcggaaagttaatcttcaatgaaattttgccgaagtcattcccatatattaatgaa
ccgacgcaagaaaacattgaagaacgaacaccagataaatatttccttgataaaggtgtg
aacgtgaaagaagaaattcgcaaacgcgaactcgttccgccgtttaagaagaaaattctt
ggtaacatcattgcggaagtatttaaacgtttcaaaattacagaaacgtctaaaatgctt
gaccgtatgaaagatcttggctttaaatactcaacaaaagcaggtatcaccatcggtgta
gctgatattgtcgtcttgccggaaaaacaagaaattttagaagaagcgcaagcgaaagtt
gatacggtattaaaacaatttagacgcggtttaattacggatgaagagcgttatgaacgt
gtcatttcgatttggagtgcggcaaaagataaaattcaaggccgcttaatggagtcgctt
gataagcgaaatccaattttcatgatgagtgactcgggagcccgcggtaacgcatcgaac
tttacgcagcttgcaggtatgcgcggattaatggcgaacccagcagggcgtattatcgag
cttccaattaaatcttcgttccgtgaaggattaacggtacttgagtactttatttcgact
cacggggcgcgtaaaggtcttgccgatacggcgttaaaaaccgctgactctggttattta
acacgtcgtctcgttgacgttgcacaagatgtcattattcgtgaagacgattgcggcaca
gaccgcggtacgttaattcgtgcgttaaaagacggtacagaagtgattgtgaaacttgaa
gagcgtctcgttggacgttacgcacgcaaaacggtgaaacatccggaaacaggcgaagtg
cttgtgcgtgaaaacgaaatgattacagaagatatcgcaaatgctattgtaaaagctggc
attgaagaagtgtggattcgttcggcatttacatgtaacacacgtcatggtgtatgtaaa
aaatgttacggacgcaacttagcaactggtgcggaagttgaagttggtgaagcggttggt
attatcgcggcacaatcgatcggtgagccaggtacacagctgacaatgcgtacgttccat
acaggtggggtagcaggagacgatattacacaaggtttaccgcgcgtacaagaattgttt
gaggcgcgtaatccgaaagggcaagcggtcatttcagaaattgatggcgttgttgtggct
attaatgaaacgcgtgatcgtcaacgtgagctcgtcattcaaggcgaagtcgagacacgt
acgtatacagccccttatagcgcacgtctcaaagtacaagaaggacagaaagttgaacgt
ggtcaagaactaacagaaggttcgatcgacccgaaagaactattgagagtcaaagatatg
aatgctgttcaagagtacttgttgcgtgaagtgcaaaaagtataccgcatgcaaggggta
gaaattagcgataaacatatcgaagttatggttcgccaaatgcttcgaaaagttcgcgtc
attgacgcaggcgatacggacttattacctggaacgttgctcgatattcatcaatttacg
gatgcaaatgcgaaagtgttgatggaagggaaacgtccggcaacagctcgcccagtatta
ctcggaattacaaaagcgtcgcttgaaacagactcgttcttgtctgcagcatcattccaa
gaaacgacacgcgtcttaacagatgcagcgatcaaaggaaaacgcgacgaattgcttgga
ttaaaagaaaacgtcattattggtaaacttgtgccggcaggaacaggaatggcacgctat
cgcaaagtaaaaccagttattaaaacgaaaaaagatgaagatgctgttacaacaaaataa
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