Agarivorans sp. B2Z047: LQZ07_17400
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Entry
LQZ07_17400 CDS
T08685
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq02024
Quorum sensing
agq03060
Protein export
agq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LQZ07_17400 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LQZ07_17400 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQZ07_17400 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
agq02044
]
LQZ07_17400 (ffh)
Enzymes [BR:
agq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LQZ07_17400 (ffh)
Secretion system [BR:
agq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LQZ07_17400 (ffh)
Eukaryotic Sec-SRP protein
LQZ07_17400 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
Zeta_toxin
AAA_33
YqeC
KTI12
AAA_30
nSTAND3
AAA_16
T2SSE
AAA_14
KAP_NTPase
ParA
APS_kinase
AAA_31
Thymidylate_kin
TsaE
Helicase_RecD
ABC_tran
NACHT
ArsA_ATPase
6PF2K
AAA_19
ResIII
Herpes_Helicase
AAA_28
ATP_bind_1
AAA_17
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UQN41536
LinkDB
All DBs
Position
complement(3811180..3812574)
Genome browser
AA seq
464 aa
AA seq
DB search
MFENLSDRLSKTLKNISGRGRLTDDNIKDTLREVRMALLEADVALPVVREFVKKVKERAL
GQEVNKSLSPGQVFVKIVQQELESAMGESNESLNLAAQPPAVVMMAGLQGAGKTTSVAKL
AKYLKEREKKKVMVVSADIYRPAAIKQLETLATEVDAIFFPSNEKQNPVDIVNGAIAEAR
TQFADVLLVDTAGRLHVDEDMMDEIKALHQAVEPVETLFVVDAMTGQDAANTAQAFNEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFMGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEEVERKVDKDQAQKLAKKVQKGKGFDLEDFREQLVQMKSMGGMMGMMDKLPGMGQV
PDSVKDQMNDKLTNQMEAIINSMTPGERQRPDIIKGSRKRRIAAGSGTQIQDVNKLLKQF
TQMQKMMKKMSGKGGMRKMMSQMKGMMPPGGMGGFGGGRGPGRF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacttatctgatcgactctcgaaaacgttaaaaaatatcagcggccgcggc
cgactaaccgatgacaacattaaagatactttgcgcgaagtgcgtatggccttgttggaa
gcggatgttgccttacccgtagttcgcgagtttgttaaaaaagtaaaagaacgtgctcta
ggccaagaagtaaataagagccttagccctggtcaagtattcgttaagattgttcagcaa
gagctggaatcagccatgggcgaatctaacgaaagtcttaatttggcagcccagcctccg
gcagtagtaatgatggctggtttacaaggtgcgggtaaaaccacctctgttgctaagcta
gctaaataccttaaagagcgcgaaaagaaaaaagtaatggttgtgagcgccgatatttat
cgtcccgctgcgattaaacagctagagactctagctacagaagttgacgctattttcttc
ccaagtaacgaaaagcaaaatccggttgatatcgttaacggtgctatcgccgaagccaga
actcaatttgcggacgtactacttgtagataccgcgggtcgtttacatgttgatgaagac
atgatggacgaaattaaagcgcttcatcaggcggttgagccagtagaaaccttgtttgtt
gtagatgcgatgactggtcaagatgcggcaaataccgctcaagcctttaacgaagctctg
ccacttaccggcgtgattttaactaaaaccgatggtgacgcgcgcggcggtgccgcttta
tctattcgtcacattactggtaagccaattaaatttatgggtgtgggtgagaaaaccgat
gctctagaacctttccacccagaccgcatagcctcacgtatcttaggcatgggcgacgtg
ctttctcttatcgaagaggtagagcgcaaagttgataaagaccaagcgcagaagctggct
aagaaagttcaaaaaggtaaaggcttcgatttagaagacttccgtgagcaattagtgcag
atgaaaagcatgggcggcatgatgggcatgatggataagttgcctggcatggggcaagtt
cccgacagtgttaaagatcaaatgaatgataagcttactaaccaaatggaagcgatcatc
aactctatgacgccgggcgagcgccaacgccccgatattattaaaggctcacgtaagcgc
cgtattgctgctggttctggtacccagatccaagatgtgaacaagctgcttaagcagttc
actcagatgcaaaaaatgatgaagaaaatgtccggtaaaggcggcatgcgtaaaatgatg
agccaaatgaaaggcatgatgcctccaggtggtatgggcggatttggcggcggtcgcgga
ccaggacgtttctaa
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