Agrobacterium sp. CGMCC 11546: GSF67_13915
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Entry
GSF67_13915 CDS
T10431
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
agrc Agrobacterium sp. CGMCC 11546
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_13915 (addA)
Enzymes [BR:
agrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSF67_13915 (addA)
DNA repair and recombination proteins [BR:
agrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GSF67_13915 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
NPHP3_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QKW98087
LinkDB
All DBs
Position
1:complement(2738393..2741950)
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AA seq
1185 aa
AA seq
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MTIDPIDAGPAADTPESWIDWTSARQRLASDPASSAWVSANAGSGKTHVLTQRVIRLLLA
GCRPSAILCLTYTKAAASEMSSRVFDRLAEWATLPDSDLKDRITAIEGKVPDRIKLAEAR
RLFAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATTLLAEARRSLLT
AVSTEDDAELAQALAYVLDLADESGLEALLSAIIANRSALRSFLHEAKQSVGLDARLRQE
MQIAAGETEETAAEAFWPLPGLSGLALDTYLTLADEVGGSRVIEVAYALREAKRQMDPVR
RMEFIEVALLTAKGEKKSDAYVINKGMQKFAPDLVDALTLARDHVVACRNRYRLVRMLVA
TKSALVLAERLIGDFEDLKKQRSQLDFEDLIERAANLLNRDTAGAWVHYKLDQGIDHILV
DEAQDTSPVQWSIIQSLAADFFNGESARMGRRTLFAVGDEKQSIYSFQGARPERFSQERD
ETKRRVDQVEQAFHRIRLPLSFRSTEDVLAAVDQVFSDPKNASGLSADNEPVEHRSNRAG
HPGTVEVWDMVAPETTEDEEDWTAPFDALRESAPATIVARRIAARIADMIGNETIIEKGV
ERTVEPGDILVLVRKRAAFVNALTRELKRRKNIPVAGADRLRLTDHIAVQDLLALGRFVV
LPEDDLSLAALLKSPLFNLTEDDVFEIAATRSETESVWQRLQVLSGEETSRLSIVTDKLR
HFISLSKTATVHDFFAAVLTLHDGRKKFLGRLGNEASDVLDEFLSFALDHERTGLPGLQA
FLSVLETDSPEVKREQDKDRGEVRIMTVHASKGLEAPVVFVVDGGSKAFNHSHVPKLRFV
EGDGDAFPVWLPGSGFSNHLIRSDEERLKTAAEDEYRRLLYVAMTRAADHLVVCGYRGQK
ENPECWHAIVKVALAENQDHCQPQLFSADGEEWQGLVWRKSEARPALAPHKPAEPRQEED
HTLPPGLLAPLPALPSLPRPLSPSGAGTIIDDGADDLAVRSPLFGEKTEASSLALQRGKL
VHRMLQALPDFAESEREEAARRYAERAARFWPATEREHLIQAVLRVLSEPAVQPAFSANS
RAEVSIMGTMTLGRQHYAVSGRIDRLAVEGDRVILVDYKTNRVPPREARELPFSHVAQLA
IYREILAPLYPGKEFVCALIYTESAAFVRVDDDAMAEALAAIKTK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgatcccatcgacgccggacctgccgccgatacacctgaaagctggatcgac
tggaccagtgcccggcagcggcttgcctccgatcccgcaagctcggcctgggtgtcggcc
aatgccggctccggcaagacccatgttttgacccagcgcgtcatccgcctgcttctggcc
gggtgccgcccctcggcgatcctctgcctcacctataccaaggccgcagcatcggaaatg
tcgagccgcgtgttcgacaggctggcggaatgggcaacgttgccggattccgatctcaag
gaccgcatcaccgccatcgaaggcaaggtgccggatcgcataaagctcgccgaagcacgg
cggctgttcgccaaggcgctggaaacaccgggcgggctgaaaatccagaccatccacgct
ttttgcgaagccctgctgcaccagttcccgctggaggccaatgtcgccggccatttctcg
gttctcgatgatcgcgccgccaccacgcttctggccgaggcgcgccgttcgcttctgacg
gcggtttcgactgaggacgacgcggaattggcgcaggcgctcgcctatgtgctcgatctt
gccgatgaaagcggcctggaagcgctgctttccgccatcatcgccaatcgcagcgcgctt
cgctctttcctgcacgaggcaaaacagtcggtcggccttgatgcccgtttgcggcaggag
atgcagattgctgccggggagaccgaggaaacggcggctgaagccttctggcccctgccc
ggtctttccgggttggcactcgacacttacctcacgcttgcggatgaggtgggaggatcg
cgtgtcatcgaggtcgcttatgcgctccgggaagcaaaacggcagatggacccggtgcgg
cggatggaattcatcgaagtcgcgctgctgacggccaagggcgagaaaaaatcggacgcc
tatgtcatcaacaagggcatgcagaaatttgcacctgatctcgttgatgcgctgacgctg
gcccgcgaccatgtcgtggcctgccgcaatcgctatcgtctggtgcgcatgctggtggca
actaaaagtgcccttgtgctggccgaacggttgatcggcgatttcgaagacctgaaaaag
cagcgaagccagctcgattttgaagatctgatcgagcgcgccgccaatctgctcaatcgc
gatacggcaggtgcatgggtgcattacaagctggatcagggcatcgaccatattctggtc
gacgaggcgcaggacaccagcccggtgcaatggtcaatcatccagtcgctggcagcggat
ttcttcaacggtgaaagcgcccgcatggggcggcgcacactctttgccgtgggtgacgaa
aaacagtcgatctattcctttcagggcgcgcgaccggaacggttctcgcaggagcgcgat
gagaccaaaaggcgtgtcgatcaggtggagcaggccttccaccgcatccgcctgccgctc
tccttccgctccactgaagatgtgctggctgccgtcgatcaggtcttttcagacccgaaa
aacgcgagcggcctcagcgccgacaatgagcccgtcgaacaccgttccaaccgcgccggc
catcccggcaccgtggaagtgtgggatatggtggcaccggaaaccaccgaagatgaagag
gactggaccgcccccttcgacgcgctgcgggaaagcgcgccggccaccatcgtcgcccgg
cgtatcgccgcgcgcattgccgatatgatcggaaacgaaaccatcatcgaaaagggcgtg
gagcgcaccgtcgaacccggcgatattctcgtgcttgtcagaaaacgcgctgccttcgtc
aacgcgctgacccgcgagttgaagcggcgtaagaacattcccgttgccggtgccgaccgc
ctccgcctgaccgatcacatcgccgtgcaggatcttctggcgctcggccggttcgtggtg
ctgccggaggatgatctttcgctggcggccctgctgaagagcccgcttttcaacctgacg
gaagacgatgtcttcgagatcgccgcgacgcgatccgagacggagagtgtgtggcagagg
ctgcaagtcctttcaggcgaagaaaccagccgtctatccatcgtcaccgacaaacttcgg
catttcatatcactgtcgaaaaccgccacggtgcatgattttttcgcggcggttctgacc
ctgcatgacggccgcaaaaaatttcttggccgtcttggcaacgaggcgagcgacgttctc
gacgagttcctctccttcgcgctggatcacgaaagaaccggcctgcccggtcttcaggct
tttctctcggttctggagaccgattcacctgaagtgaagcgcgagcaggacaaggatcgc
ggcgaagtgcgcatcatgaccgtgcatgcgtccaaggggcttgaagcaccggtggtcttt
gtcgtggatggtggctcgaaggccttcaaccacagccatgtgccgaaactgcgcttcgtg
gagggggatggcgatgcctttccggtctggctgcccggcagcggtttttccaatcatctc
attcgctcggatgaggaacgcctgaaaacggccgcggaagatgaatatcgtcggctgctt
tatgtggcgatgacccgcgccgccgatcatcttgtcgtctgcggttatcgcggccagaag
gaaaatcccgaatgctggcacgctatcgtcaaggtggcgcttgcggaaaatcaggatcat
tgccagccgcagctgttcagcgccgatggcgaggaatggcaggggcttgtctggcgtaag
tccgaagcacgcccggcacttgcaccgcacaagcccgcagaaccccggcaggaagaagac
cacacgcttccgccgggccttcttgcccccctgcccgccctgccctccctgccaaggccg
ctcagcccatcgggcgcgggaaccatcattgatgacggtgcggacgatctggccgtgcgt
tcaccgctgttcggagaaaaaaccgaggcctccagccttgccctgcaacggggtaagctg
gtgcatcgaatgctgcaggccctgccggattttgcggaaagcgagcgggaagaggcagcc
cggcgttatgccgagcgcgcagcgcgtttctggcccgccactgagcgggaacatttgatc
caggcggttttgcgggtcctctccgaaccagcggttcagccagccttttccgccaacagc
cgtgcggaagtgtcgattatgggcacgatgaccctcggccggcagcactatgccgtctcc
ggccgcatcgaccggctggcggtggagggtgatcgggtcattctggtcgattacaagaca
aaccgcgtgccgccgcgcgaagcacgcgagcttcccttctcgcacgtcgcgcagcttgcc
atttatcgcgaaattctggcgccgctttaccccggcaaggaatttgtctgtgcgctgatt
tatacggaaagtgccgcttttgtgcgggttgacgacgatgccatggcagaggcccttgcc
gcaataaagacaaagtga
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