Anthonomus grandis grandis (boll weevil): 126735026
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Entry
126735026 CDS
T08911
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126735026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126735026
Enzymes [BR:
agrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
126735026
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126735026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
MMR_HSR1
CbiA
AAA_22
ATP_bind_1
Pirin_C_2
Motif
Other DBs
NCBI-GeneID:
126735026
NCBI-ProteinID:
XP_050294853
LinkDB
All DBs
Position
4:complement(18167472..18179992)
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AA seq
424 aa
AA seq
DB search
MSEDKKSVLQEFKLDADNELRFEVESKGEKVYLTLKSGLAEIFGTELVKGKTYEFTAGAK
VAVFTWQGCTIEVKGKTDVIYTAKETPMVVYSNCHAALEIMRSESEKDNKRGPIAMVVGP
TDVGKSTLCRILLNYGVRMGRRPIFVDLDVGQGKVTIPGCVGALVIERPASIDEGFSQEA
PLVYNFGHKSPSDNFKLYKKIVNQLASTVKERLEVNKKTRHSGVIINTCGWIKGNGYKLL
LDSCHAFEVDVIMVLDQERLYNELVRDMPAYVKIVFLQKSGGVVELSKSARIEARDQRIK
EYFYGTPKNQLYPHSFDLKWSEVKIFKIGAPPLPDSCLPHGMKPEDHLTKLVPITPNPGI
SHHILAVSFAEKEDDDVILSHVAGFVCVSHIDTERQTITLLSPQPKPLPNNILVLSELQF
MDSH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagataaaaaatcggtcctacaagaattcaaactcgacgccgacaatgaactc
cgcttcgaagtcgaatctaaaggcgaaaaagtgtatttaacactaaaaagcggcctggca
gagatattcggcacagaactggtaaaaggtaaaacttacgaatttactgcgggcgccaaa
gtagcagtgtttacatggcagggctgtaccattgaagttaaaggcaaaactgatgtcatt
tatactgccaaagaaaccccaatggtagtttattctaattgccatgcagccttagagatt
atgcgctctgaaagtgaaaaagacaataaaaggggtcctattgctatggttgttgggcca
acagatgttggaaagtcaactttgtgcaggatcttgctaaattatggtgttagaatgggt
cgaagacctatatttgtagatttagatgttgggcagggtaaagtcactattccaggatgt
gttggagcacttgtaattgaacgtcctgcatcaatagacgaagggttttctcaagaggcg
cccttggtatataattttggccacaagagtccttcagacaattttaagctatataaaaag
atcgtcaaccaattggcgtctactgttaaagaaaggctggaagttaacaaaaaaacaaga
cattcaggtgtaattataaacacttgcggttggataaaagggaatggttataagctgcta
cttgattcatgccatgcattcgaagtagatgttattatggtgttggatcaagaaagacta
tataatgaattggttagagacatgcctgcatatgttaagattgtctttctacagaaaagt
ggtggggttgtagagctgtcaaagagtgccagaatagaagcgagagaccaaagaattaaa
gaatacttttatggaacgccaaaaaatcagctgtacccccattcttttgatctaaaatgg
tccgaagtaaaaatttttaaaataggggcacctccactacctgattcatgtctaccacat
ggtatgaaaccggaggatcatctaaccaaactagtcccgataactccaaatccaggaatt
tcgcatcacattttagcagtcagttttgctgaaaaggaagatgatgatgtaattttatcg
catgtagccggatttgtatgtgtttcacatattgatacagagaggcaaactattactttg
ttatcaccacagcctaagccactacccaacaatatccttgtgttgtctgagttacaattt
atggatagtcactga
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