Apium graveolens (celery): 141671987
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Entry
141671987 CDS
T11340
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141671987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141671987
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
141671987
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
141671987
NCBI-ProteinID:
XP_074334563
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Position
7:118538495..118548191
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AA seq
882 aa
AA seq
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MFRLPDLLVIMESATQRLQNFPISPSFQQSPRSDFYSTTGRKRMRINEDKGYSNPLKTDS
SVECREADYLQDLESGKYGSATEDIKILLERGLDLLKPNYAKYPDLLYRCQDKSSINEGT
KQLPVFVNLDDDCVSQGMRPAPVLIIDSDDDEPKNPSSFCQYEGVHLPMPASGPLILEPL
KMEYPHSQTWVDDETLANETEVTKDKGQYVGVEDDEQFDDNCDGLADIWTEMTFALECSK
EAPIGPSDDNSEEDEDDCEHSFILKDDIGYVCRICGVIQKKIENIIEYQYAKNTKNSRTY
WYEGRNGKDGEILEDLPVGLPEEDFTATELFAHPRHSKKMRPHQVEGFNFLVRNLVSENP
GGCILAHAPGSGKTFMIISFIQSFMAKYPLARPLIILPKGIMPIWKKEFLLWQVDVIPLL
DFYSVKADGRLQQLEVLKHWALERSILFLGYQQFSSIVRDDDTSKITTACQEILLTHPSL
LILDEGHTPRNEETAMLAALEKVKTARKVVLSGTLYQNHVKEVFNILNLVRPKFLRMETS
KIIKKRILSRVSSSKRGNMFKKGDNEFYELVEQCLVKDDNLKRRALIIQELREMTCKVLH
YYKGDFLDELPGLFDFTVFLNLTHQQKREVVALKKYKGKFKISSGGSALYVHPELFKLPR
AHEDKDKVDQSKVDEVLESLDVREGVKAKFYINTLRLCESSDEKLLVFSQYLPPLKFLER
LTVKFKGWSVGKEIFVITGQTNSEVHEREKLVEIFNNSPDAKVFFGSIKACGEGISLVGA
SRIIILDVHLNPSVTRQAIGRAFRPGQTKKVYTYRLVAADSPEEEDHNTSFRKESISKLW
FEWNESCGPQDLQLETADVKDCGDEFLETPWLNQDVVSLYKR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctccctgatctcttggtgatcatggagtcggctacacagcgtttgcagaat
ttcccgatttcgccttcgtttcagcaatcccctcgatccgatttctattcaacaacggga
aggaagaggatgagaattaatgaagacaaaggttattctaacccgttaaaaactgacagt
tctgttgaatgccgagaagctgattatctgcaagatctggaatcggggaaatatggaagt
gcgacagaagatattaaaatacttttggaacggggattggatcttttgaagccaaattat
gcgaagtatcctgatcttctgtacaggtgccaagataaaagctccatcaacgagggtaca
aagcaattacctgtgttcgttaacttggatgatgattgtgtctcccagggcatgagacca
gcacctgttctaataattgactcagatgacgatgaacctaaaaatccgagctcgttctgt
cagtacgagggtgttcacttgccgatgccagctagcggacctcttattttagaaccattg
aaaatggagtaccctcatagccaaacatgggtagatgatgaaaccctggctaatgaaact
gaagtcacgaaagataaaggtcaatatgttggtgtcgaagatgatgaacaatttgatgac
aattgtgatggcctggctgatatctggacggagatgacatttgctctggaatgttccaag
gaagctcccataggtccatctgatgataactctgaagaggatgaagacgattgtgagcat
tcttttattttaaaggatgatattggctacgtttgtcgtatctgtggagtcatccagaaa
aaaatagaaaacattattgagtaccaatatgcaaagaacacaaagaatagtagaacttac
tggtatgaaggacggaatggcaaagatggtgaaattttagaagatcttcctgttggattg
cctgaagaagactttactgcaactgaactctttgctcatccaaggcacagcaaaaaaatg
agacctcatcaagttgagggctttaattttcttgtgcggaacctggtttcggagaatcca
gggggatgtattttggcccatgctcccggatctggtaaaactttcatgatcatcagtttt
atacagagtttcatggcaaaatatcctctcgcaaggccacttattatactaccaaaaggt
atcatgccaatttggaagaaagagttcttattatggcaagttgatgtaattcctcttctt
gacttttactccgtaaaagcagacggcaggcttcagcaactggaagttctaaaacactgg
gcattggaaaggagtattttattcttaggataccagcagttttcttctatagtaagagat
gatgatactagcaagatcacaactgcttgtcaagagatcctattgacccatccttccctt
cttattttggacgaaggtcatacaccaagaaatgaagaaactgccatgctagctgctctc
gaaaaagtcaaaacagctcgaaaagttgttctttcaggcacattgtaccagaatcatgtc
aaagaggttttcaatatcttgaatcttgtacgaccaaagtttttacgcatggaaacctcg
aagataattaaaaagcgcatcctgagcagagtgtcgagctcgaagagagggaacatgttt
aagaaaggcgataatgaattctacgagttggtggagcaatgtcttgtgaaagatgacaac
ctcaagaggagggcactcatcatacaagagttgagggagatgacttgcaaggttcttcac
tattacaagggggattttcttgatgaattacctggactatttgattttacagtttttcta
aatctcactcatcaacaaaaacgtgaggtcgtggctctgaagaagtataaaggaaaattc
aaaatcagttctggtggtagtgccctttacgtgcacccagagttgtttaaacttcctagg
gctcatgaggacaaggataaagttgatcaatcaaaagttgatgaagtgctagagagtttg
gatgtgagagaaggagtcaaagccaagttctatattaatacgcttcgcttgtgtgaatca
agtgatgagaagctccttgtgttcagtcagtaccttccgccattgaagtttttggagaga
ctaacagtaaagtttaaggggtggagtgtagggaaggagatatttgtgataactggtcag
acaaatagtgaagttcatgagagagagaagcttgttgagatttttaataattctcctgat
gcgaaagtattctttggatcaataaaagcttgtggtgagggaatttcacttgttggggcc
tcgcggataattatacttgatgtacatttgaacccgtcagtcactcgccaagcaataggt
cgtgcattccgacctggtcaaacaaagaaggtttacacatatcgtctcgtggctgcggat
tcacccgaggaggaagaccacaacaccagcttccggaaggagtctatctcgaagttatgg
ttcgaatggaacgaaagctgcggtccacaagatctccagttggagactgcagatgttaaa
gattgtggtgatgagtttctggaaactccatggttaaatcaagatgtagtctctctctac
aaaaggtaa
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