Apium graveolens (celery): 141677394
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Entry
141677394 CDS
T11340
Name
(RefSeq) oligouridylate-binding protein 1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141677394
03041 Spliceosome [BR:
agrv03041
]
141677394
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141677394
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141677394
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
RRM_PARP14_3
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
141677394
NCBI-ProteinID:
XP_074339412
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All DBs
Position
8:14678942..14685992
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AA seq
403 aa
AA seq
DB search
MQYQQRLKQQQAIMQQSLYHPGLLAPPQIEPVLSGNLPPGFDPSTCRSVYVGNIHPQVSE
PLLHEVFSSTGLLESCKLIRKEKSSYGFVDYFDRRSAALAIVSLNGRHLFGQPIKVNWAY
ASTQRADTSGHFNIFVGDLSPEITDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSF
QNQQDAQNAINELNGKWLGSRQIRCNWAAKGAGADDKQNSDAKSVVELTNGTSEDGQERV
DDSPENNPLYTTVYVGNLGPEVSSVDLHRHFHAFNAGIIEDVRVQRDKGFGFVRYSNHAE
AARAIQIGNARILFGKPIKCSWGSKPTPPGASSTPLPPPSAAVASGFSAVDLAAYERQLA
LARMGGAQALMQQQVQRMGAAGQAIYDGGYPGIASTQPPMYFQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcagcagaggttgaagcagcaacaagcaattatgcaacaatctttatatcat
cctggtcttttggccccaccccagatagagcctgtcttgagtggtaacttgcctcctggc
ttcgatccaagtacatgccgcagtgtttatgttggaaacattcacccgcaagtttcagaa
cctcttttgcacgaagttttctctagcactggtctcctggaaagctgcaagcttattcgg
aaagagaagtcatcctacggctttgtggactactttgatcgcagatcagctgctcttgct
attgtttctctcaatggaaggcacttgtttggacaacctatcaaggttaactgggcatac
gcgagtactcagagagcagacacgtcaggtcacttcaacatttttgtgggtgatcttagc
cctgagattacagatgccactctgtttgcttgcttttctgtttacagtagttgctcagat
gctagagtaatgtgggatcagaaaactgggcgttcaagaggatttgggtttgtttctttt
cagaatcaacaggatgctcaaaatgcaataaatgagttgaatggaaagtggcttggaagc
agacaaattcgttgcaactgggctgcaaagggtgcaggagctgatgacaaacagaactca
gatgccaagagtgttgttgaactaacaaatggaacatcagaagatggtcaagagagagtt
gatgattccccagagaataatcctctgtatacaactgtatatgttggcaatcttggtcct
gaggtttcctcagttgatcttcataggcatttccatgcatttaatgctggaatcatcgaa
gatgttcgtgttcaacgtgataaaggttttggttttgtgagatacagtaaccatgctgaa
gcagctcgcgctattcagatagggaatgccaggatacttttcggcaaaccaataaagtgc
tcatggggtagtaagccaacaccacctggggcgagctccactcctctaccccctccaagt
gctgcagttgcctcgggattttcagcagttgatcttgccgcatatgaaaggcagctcgct
ttagctagaatgggtggtgcccaagcgctgatgcagcaacaggtccagcgaatgggggct
gctggtcaggctatatacgatggtgggtacccaggcattgcttcaactcagccacctatg
tacttccagtaa
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