Apium graveolens (celery): 141685933
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Entry
141685933 CDS
T11340
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141685933
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141685933
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141685933
NCBI-ProteinID:
XP_074347109
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Position
9:214792801..214795030
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AA seq
422 aa
AA seq
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MAVSHVKSIFFTCLLLLLIIVGAMAASDHQWVKEVEGLNGDAVPNPDEIADMVHESIINS
TERRKLGFSCATGNPIDDCWRCDPNWHLNRKRLADCGIGFGRDAIGGRNGRFYVVTDPGN
DDPINPRPGTLRHAVIQNEPLWIIFSRDMVITLKQELIMNSYKTIDGRGVNVHIANGACI
TIQFISHVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWVDHNSLS
NCADGLVDAVIGSTAITVSNNYFSQHNEVMMLGHSDSYLGDKLMQVTIALNHFGEGLTQR
MPRCRHGYFHVVNNDYTHWGIYAIGGSANPTINSQGNRYLAPNNPYSKEVTKRVNTIGNQ
WKGWNWRSEGDLFLNGAYFTPSGAQTSSSYAIASSMRAKPFSMVGIMTSGAGALGCRRGV
RC
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctcatgttaaatccatctttttcacttgcttactgcttctacttatcatc
gtcggagccatggccgcttctgatcaccaatgggtgaaagaagttgaaggtctgaatggt
gatgcagttcctaatccagatgagattgctgacatggtgcacgagagtataattaacagc
acggaaaggaggaaactgggattctcttgtgcaactgggaatcccattgatgattgttgg
cgttgtgatcctaactggcatctcaatcgcaagcgccttgctgattgtggcatcggtttt
ggtcgagatgccattggaggccgtaatggtcgtttttatgttgtaaccgatccaggtaat
gatgaccctattaacccccggcccggcaccctgcgccatgctgtcatccaaaatgagcct
ctctggattattttcagccgagatatggtgataacattaaagcaagagcttataatgaac
agctataagacgattgatggtcgtggtgtcaatgtccatattgctaatggagcgtgcatc
actatccagtttatttcccatgtcattattcatggtttgcatatccatgactgcaaaccc
actgggaatgctatggttagaagctctccatcccattttggctggaggacaatggctgat
ggtgatgcagtttccatctttggttcgagccacatatgggttgatcacaattcactatct
aactgtgctgacggccttgttgatgctgtcatcggctcaactgctattacagtatcaaac
aattacttctctcaacacaatgaggttatgatgttgggtcacagtgatagctacttggga
gacaagctaatgcaagtgactattgccttgaaccattttggagagggtcttacccagaga
atgccaaggtgcagacatgggtatttccatgtggtcaacaatgactatactcactgggga
atatatgcaattggtggaagtgcaaatcccaccatcaacagccaaggcaacagatacctt
gccccaaacaatccttattcaaaggaggtgacaaagagagtaaacactattggaaaccag
tggaaaggttggaattggagatcagagggtgacttgttcttgaacggggcctattttact
ccatccggagctcaaacttcatcaagttatgccatagcttcaagcatgcgagcaaagcct
ttttcaatggtcgggatcatgacttctggagctggtgctcttggctgccgcaggggagtc
cgatgctag
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