Apium graveolens (celery): 141692281
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Entry
141692281 CDS
T11340
Name
(RefSeq) uncharacterized protein LOC141692281 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141692281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141692281
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141692281
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141692281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
141692281
NCBI-ProteinID:
XP_074353141
LinkDB
All DBs
Position
10:complement(77723436..77743559)
Genome browser
AA seq
2399 aa
AA seq
DB search
MVPFSVTASTQIRYLLENVNESNFDSVFRELCEFIGYGTEESILVLQTCFDQLNMHVKDY
KNMQLEPIFVSIFRSILNRPNFSTLLCQSLRSVPVNEEFLDSLSKALQLATPERIVVGLA
LSDSENPDVRMCGKNFCINQIAQLCSNHESLESAEQIQNILIFLNQTEGLSEHVDSFMEI
PSLVHLKDDSEFILSPLITDELREANFFRNLDMLNDGSENDFDTIFTEMEKELSMSELIT
EFGYGCTVNVSQCKEMLSLFLPLTEVTVSRIFGTVVRTSAGLDSYQNTYLTFCSAITGSS
LSDLPLVDSWNIDVLLESIKQVAPGINWIKVFENLDHEGFYIPNEASFALFMSIYRYACQ
EQFPLHAVCGSVWKNTEGQLSFLKHAVSVPPEVFSFAHSGRQLAYIDAVNDHKFHLGHAN
HAWLCLDLVEVLCQLAEKGHAGSVRPMLEYPLKHCPEVLLLGMASINTIYNLLQYEVYSI
VFPELLKSSTGASVILHLWHVNPSLLLRGFIDAFNMDTSNMIKVLELCHELKILSLVLEM
VPFSFGIRMAALASRKELVDLEKWLSINLITYKDTLFEECLKFVKEVQISTQDMPPTRFD
QSGSLWNIYSETISTFLKVLQANTASISSRSLCEEIEKLNVTVMHSNIRVVNPSAADSST
ADGYAEDVETEINSYFHQMFSGQLAVDTMIQMLARYKESFEKREQSIFECMIANLFEEYK
FFSKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPADSKMFVFGTKALEQ
FVDRLIEWPQYCNHILQISHLRGTHSELVAFIERALARISSSHSESDVGHVPAVDQHQNS
ITAAHAEMQGSSFVSVGSSSMSIASSSVQLQQRQQGSLEDRHKASPPLSSYMKPALSSAT
NASISSADTSSTLKSTANPALSSTTGFVRPTRSTTSARFGSALNIETLVAAAERRETPIQ
APASEIQDKISFIINNLSPANAEAKAREFSEFFQEQYYPWFAQYLVMKRASIEPNFHDLY
LKFLDKVNSKPLNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKITIGRNQV
LRAREIDPKSLIIEAYEKGLMIALIPFTSKILEPCHNSLAYQPPNPWTMGILALLTEIYA
MPNLKMNLKFDIEVLFKNLAVDMKDVTPSSLLKDRPRETEGNPDFSNKDVAPQAAIVGDV
KSVVPTLNQVELPHDVPSPAHPPAHSHLLSQYTPSVHLSAPTLEDEKVTPFVLSDQLPSN
QGLLQVQSPFTISQLPTPASNIEQQVVVNPKLHSLGLQRHFQSVLPAVMDRSIKEIVSSI
VQRSVSIATQTTKELVLKDYAMESDETRIRNAAHLMVASLAGSLAHVTCKEPLRASITSH
LRSSVQGLTLANDLLEQAVQLVANDNLDLGCAHIEQAATEKAIQTIDGEIAQQLSIRRKQ
REGVGPAFFDTSLYTQGHMGVLPESLRPKPGRLSHSQQRVYEDFVRLPWQNQSSQASNLS
PVGPSTSVSSGVSQAYSSASGQLNSGPYSALGNTGMGAVAHSLDLGPEEMDAGPLKQLSV
STVPSGLAEGVVQQNFESDAIPISFSSASTSELQSAEQTIASKESGVSVQSLPSTSTTER
PGSSVSEPLLTTGDALDKYQLVSEKLETLVTIDGAEADVQAIVAEVPGIIVRCISRDEAA
LAVAQKVFKGLYENESNNAHVGAQLAILAAIRDVSKLVVKELTSWVIYSDEDRKFNIDIT
VGLIRSDLLNLAEYNVHMAKLLDAGRNKAATDFAVSLIQTLVMNNSKVISELHHLVDALA
KLAARPGSPESLQQLVEIARNPSSSATGLSGLVAGKEDNLRHSRDRKQTTGLSAASREEY
YLLDSVEPDPVGFRNQVSMLFAEWYQICELPGAKDAASAHFVLQLLQSGLLKGDDMLDKF
FRLLMELSVSHCLQSHQQTQPLSFLAIDIYAALVFSILKFFPADQGSSKLSLLSKVLAVT
VRTIHKDAEEKKTAFNPRPYFRLFINWLLDLTTLEPVSDGANLQVLIALANAFHALQPLK
IPAFSYAWLELVSHRSFMPKLLTGNPQKGWPFFQRLLVDLFQFLEPFLRNAELGEPVHFL
YKGSLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLK
IDLLAEITQAPRILSEVDAALRAKQIKSDVDEFLKTKQQGSSFLSELKQKLMLPPSDAAR
AGTRYNVPLLNSLVLYVGMQAIQQLQARTPPHAQASVSLAAFHVGAALDIFQLLITELDT
EGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPW
GLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRSCGGPKPVEEGVVSGGLPDMH
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atggttccgttctcagttacggcatcgacccagattcgatatctgctcgaaaacgtcaat
gaatcgaactttgactctgtgtttcgagaattgtgtgagtttattggatatggaactgag
gaaagcatattggtactccaaacctgctttgatcaattgaatatgcatgtgaaagactat
aagaatatgcaactggagcctatatttgtatcaatttttagaagcattttgaatagacca
aatttcagtacactattgtgtcagtcactaagaagtgtgccagtcaatgaagagttcttg
gatagtctctctaaggccttgcaacttgcaacacctgaaagaattgtagtaggtcttgct
ctatcagattctgaaaaccctgacgtcagaatgtgtgggaagaatttctgcataaatcag
attgcacaactatgttccaatcatgagtcgctggaatctgctgagcaaattcaaaacatt
cttattttccttaatcaaactgaaggactttcagagcatgtggattcatttatggaaata
ccatctctggttcatttgaaagatgattctgaatttatcttatctcctttaattactgat
gaactgcgtgaagccaactttttcaggaatttggacatgctcaatgatggctctgagaac
gactttgatactatctttactgaaatggagaaagaattaagtatgtctgagctgattaca
gaatttggttatggttgtaccgtgaatgtctcacagtgcaaggagatgctatctctattc
ctaccgttgactgaagttactgtttctaggatattcggaacagtcgtccgcaccagtgcg
ggacttgatagctaccagaatacctacttaacattttgttctgctatcaccggcagtagc
ctgtcggatctgcctctcgtagattcttggaacattgatgttctcctcgaatcaataaag
caagtagctccaggaatcaactggataaaggtgtttgagaatcttgatcatgagggcttc
tacattcccaatgaggcttcttttgctcttttcatgtctatttacagatatgcatgtcag
gaacaattcccgctccatgctgtttgtggctctgtatggaagaatactgaaggccagctg
tcttttctcaaacatgctgtctcagtaccacctgaagtatttagctttgcacattctggg
aggcagctggcttacatagatgccgtcaatgatcacaagttccatctgggacatgcaaat
catgcttggctatgtcttgaccttgttgaggtgttgtgccagctagcagagaagggtcat
gcaggttctgttcgaccaatgctggagtatcctctcaagcactgccctgaagttttgttg
ctggggatggcgagcataaatacgatatataatcttctccagtatgaagtttattctatt
gtctttcctgagttgctgaaaagttctactggggctagtgtgatccttcatctttggcat
gtcaaccctagccttctgctgcgtggatttatagatgcatttaacatggacacgagtaat
atgattaaggttttggagttgtgccatgagctaaagattctctcactggtattggagatg
gttcctttttcttttggtatcaggatggctgcccttgcttctcgaaaagaacttgtagac
ctggaaaaatggctgagtattaacttaattacatataaagatacccttttcgaggagtgc
ctcaagttcgtaaaagaggtccaaatcagcactcaagatatgccacccacccgtttcgat
cagtctggatctctttggaatatatattcggaaacaatttctacatttttaaaggtcctg
caagctaatacggcctcaatttcttctcgcagtctctgcgaggaaatagagaagctgaat
gtgactgttatgcattctaatataagggttgtaaatcctagcgctgctgattcctcaact
gctgatggatatgcggaagatgttgagacagagatcaactcctattttcatcagatgttt
tctggccagttggcggttgataccatgattcaaatgcttgctcggtacaaagagtcattt
gaaaagagggaacaatctatatttgagtgcatgattgcaaatctgtttgaagaatataaa
ttcttttccaagtaccctgaaaggcagctcaagattgcggcagttctttttggatcactc
attaagcatcaacttgttactcatctcacacttggcattgctttgcgtgccgttttggat
gcactgcgcaaaccagcagattcgaaaatgtttgtttttggcaccaaagctttagaacag
tttgttgaccggctgattgagtggccacagtattgcaatcatattttgcaaatatctcat
ttacgtggtactcattcagagcttgttgcctttattgaacgagcgcttgccagaatttca
tcaagccattcagagtcagatgtgggccacgttcctgctgtggatcagcaccagaattca
attactgcagcacatgcagagatgcaggggtcgtcattcgtttcagttggatctagtagc
atgtcaatagcttcctcttctgtccagcttcaacaaaggcagcagggttctttagaagac
agacataaagcttccccacctttgtccagctacatgaaaccagctttatcatctgcaacg
aatgcatcaatatcctccgctgatacatccagcactctgaagagtacagctaatcctgca
ttatcttcgaccactggttttgttcgtcccacccgctcgactacctcagcacggtttggc
tctgctttaaatattgaaacacttgttgctgctgcagaacgaagggaaactccaatacag
gccccggcatccgaaattcaggataaaatatcatttatcataaacaacttatctccagct
aatgcggaagctaaagcaagagaattttccgagttcttccaagagcaatattatccttgg
tttgcgcagtatttggtaatgaaaagagcaagcatcgaaccaaattttcatgacctgtac
ttaaagttcttggacaaagttaattcaaagcctttgaacaaagagattgtgcaagctact
tatgagaactgcaaggttttgttgggatctgaacttataaaatcaagttctgaggaacgt
tcattgttaaagaacctgggtagctggcttgggaagataacgataggcaggaatcaagtg
ttgcgagctcgagagattgatcccaagtctttaattattgaggcttatgagaagggtttg
atgattgcattgattccatttacttcaaagatattggaaccttgtcacaacagtctagcg
tatcaaccacccaatccttggactatgggtatccttgcattactaactgagatttatgca
atgccaaatttaaaaatgaaccttaagtttgacattgaggttctatttaaaaatcttgct
gtggatatgaaagatgtcactcctagttctcttctcaaggacagaccaagggaaacagaa
ggaaatccagatttttccaacaaagatgttgcaccgcaggcagcaatagttggtgatgtt
aagtctgtagtgcctactctaaatcaagttgagctaccacatgatgttcctagtccagcc
catcctccagcacattctcacttattatcccagtatactccttctgttcatctttctgcg
ccaacattggaggatgagaaggtgactccttttgtcttatctgatcagctcccttctaat
caagggcttttacaagtgcaatctccgtttactattagccagcttcctacaccagcgtct
aatattgaacagcaagtggtggtcaatcccaagttgcatagtctgggactgcagcgacat
ttccagagtgtacttcctgcagttatggatcggtctatcaaagaaattgtatctagtatt
gtgcagcgcagtgtttctattgcaactcaaacaacaaaagaactagtgctaaaggactac
gctatggaatcagatgagactcgaattcgtaatgctgcacacttaatggtggcaagtttg
gccggaagcctcgcccatgtgacatgcaaggaacctctccgtgcttcaattacaagtcac
ttgagaagctcagtccagggtttgacacttgcaaacgatctccttgaacaagctgtccag
cttgttgctaatgataaccttgatctgggatgcgctcacattgaacaagcagcaacggag
aaggctatacagactattgatggggaaatagctcaacaactctctataagaaggaagcag
agagagggtgttggtccagcattttttgatacaagcctgtatactcaaggtcacatgggg
gttttacctgagtccctccgacccaaacctgggcgtctgtcgcactcacaacagagagtc
tacgaggattttgtccggctaccctggcaaaatcagtctagccaagcctcaaatctttct
ccagttggtccttcaacatctgttagtagtggcgtttcccaggcatatagttcagcatct
ggtcaactgaattctggtccgtactctgcccttgggaacacaggaatgggtgctgttgca
cattcccttgatcttggacctgaagaaatggatgctggtccactaaaacaacttagtgtt
tccacagtgccttctgggttggctgaaggtgtagttcaacaaaattttgaaagtgatgcc
atccctatttctttttcttctgcttcaacgtctgagttgcagtctgcagaacaaacaatt
gcttcaaaagaatctggagtatctgtgcagtcattaccttctacatccacaactgaacga
cctggaagcagcgtctcagaaccattgttaactacaggcgatgcactggacaagtaccag
cttgtttcagagaagcttgaaactttagtaactattgatggtgcagaagctgatgttcag
gcaattgttgctgaggttcccgggatcattgtaaggtgcataagtcgagatgaggctgca
ttggctgtagcacagaaggtttttaaagggctttatgaaaacgagtcaaacaatgcacac
gttggtgcgcagcttgcaattcttgctgccattcgtgatgttagcaaacttgttgtcaag
gagctgactagttgggtaatctactccgacgaggaccgaaaattcaacattgatatcact
gttggccttattcgaagcgacttgcttaatcttgcagagtataatgtccatatggcgaag
cttcttgatgcgggaaggaataaggctgccacggactttgcagtttccctcattcaaact
ctagtgatgaacaattctaaagtcatatctgaattacatcatcttgttgatgcacttgct
aagcttgcagcaaggcctggatctcctgagtcgttacaacagcttgtggagattgctaga
aatccttcttctagtgctactggtttatctggtcttgttgccgggaaagaggataaccta
agacactctagagacagaaagcaaactactggtctatctgcagcaagccgggaagagtat
tatcttttggattccgtggaaccagatccagttggatttcgtaatcaggtctcaatgctg
tttgcagaatggtatcagatatgtgaacttcctggggcaaaggatgcagcttcagctcac
tttgttttacagttgctgcaaagtgggttgctgaaaggggatgatatgttggataaattt
ttccggcttctcatggaactctcggtgtctcactgtctacaatcacatcaacaaacacag
ccgctgtctttccttgctattgatatatatgccgcacttgtcttttcaatactcaagttt
tttcccgcagaccagggatcaagtaaattatctctgttgtctaaggttctggcggttact
gtgagaactattcataaagatgcggaggagaaaaaaacagctttcaatcctagaccttat
ttcaggctgttcatcaattggctgcttgacctgactacgttggagccagtgtctgatggt
gcaaacttacaggttctgatagcacttgccaatgcattccatgcactgcaacctcttaaa
atacctgcattcagctatgcatggcttgagcttgtgagccaccgtagtttcatgccaaag
ttgctgactgggaatcctcagaagggttggccttttttccagcgtttactggtagatctg
ttccagtttttagagccattcttgaggaatgctgaactcggagagccggttcattttctg
tataaaggttcactgagggtattgttagtgttacttcatgatttcccagagttcctctgt
gattatcattttagcttctgcgatgttatccctcccagttgcatacaaatgcgaaatata
attctaagtgcatttcctcgcaacatgaggcttccagatccttcaactcccaacttgaag
attgatctgttggcggagatcactcaggccccacgtattctctcggaggtcgatgcagct
ctgagagcgaagcagattaagagtgacgttgatgaattcctaaagacaaagcaacaggga
tcttcttttctttctgagttgaagcaaaaattgatgcttccaccaagtgatgctgctcga
gctggaacacggtacaatgtacctctgctgaactcccttgtactttatgttggaatgcag
gctatacagcagctgcaggcaagaactccccctcatgcacaggcaagcgtctcattggct
gcattccatgtgggtgctgctttagacatttttcagttattaatcacagagctagacaca
gaagggcggtacctcttcctgaatgctgttgctaaccaactacgttatccaaacaatcat
acacattatttctcgttcatcttgctctacttgtttgcagaatcaaaccaggaagtaatc
caggaacaaattaccagagtcttattggaacgcctcattgtcaatcgacctcatccttgg
ggcctactaatcacgttcattgaactcataaagaatccgagatacaacttctggagtcgg
tcttttaccaggtgtgcgccggagattgagaagctctttgagtcagtctcgagatcatgc
gggggtccgaaacccgtggaagaaggggtggtttcaggcgggttgccagacatgcactag
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integrated database retrieval system
