Apium graveolens (celery): 141693424
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Entry
141693424 CDS
T11340
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
agrv Apium graveolens (celery)
Pathway
agrv03440
Homologous recombination
agrv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141693424
03460 Fanconi anemia pathway
141693424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrv04121
]
141693424
03036 Chromosome and associated proteins [BR:
agrv03036
]
141693424
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141693424
Ubiquitin system [BR:
agrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141693424
Chromosome and associated proteins [BR:
agrv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
141693424
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
141693424
FA (Fanconi anemia) pathway
Downstream FA components
141693424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
141693424
NCBI-ProteinID:
XP_074354626
LinkDB
All DBs
Position
10:complement(60479778..60489361)
Genome browser
AA seq
1262 aa
AA seq
DB search
MPTWQLHSDAENNIRWSHLSDDPQIQVQIAAPTQIHRSFASISDLSLQGYAKLKERDSSN
NVNESGYQMFRTGSGKPVVVNQSSLSKASAILRDVVTDQVCPNFTGNVGGPLTSPSTFRN
GFRNSLAIKKSALSKASSPCSNETEATMDMGSGITVDTDYSKMKESHTNNVNESRYQVFW
TGPGKPVVVNQSSLSKASAILGDVLLDQGCPKFTGNVGGPLRSPSTFRNGFRNSPALKKS
PLSKASSLLSNENEATVNTSSRGTVDSGQVKEINRGCDLGNSMFQTGSGKTVNISTSGLA
RAQKLLCLKDEQTHQGFEEMTQQLHVRASNRQSLPHLGMKMGIADKQSKDSISSLISPLK
VRSETSSSKLMEVTPDSLHSISKPSSIKFHTAGGRSILASSNSLQRARSLLGDPELGSFM
NEGDAGEPVFSIYKDKKPELNSNKLYCLDSRVSDQHSVTRKQVSKDFISPLRPASYQKES
FVNVGSGKNLIGNFDAVVHESTGYNDVKGFRNYPFSSVKIAPDRSLTGTGFLNGLHKKPP
GFPEVNISNTIDMGNKINKQAVAVKRVSERRSSGSFKRPRISKFITPFNNEIPLVENGSL
VLAPEESSYKNKVSSRYPYQASRKYVKEYFGVPPSVNTMLEHLPACIRTMNPDRAEQHCF
PGECGFNSIGKEAFYMMLMQFGASMKHISETWVSNHYKWIIWKLACYERCYPGRYLTVSN
VMEELKYRYEREVNHGHRSAIKKILEGDAPPSSVLVLCISSVQTNTEAMFENISTSRGFD
RSIVANVELTDGWYSVNAVLDAPLSKKLASGKLFVGQKLKISGAGLCGWVGPISPLEAST
TVSLVLHINGTYRTHWADRLGFCKTGCAPLAFNCIKSGGGAVPCTIIGIQRIYPVLYRER
LSDGEYTVRSERMEAKMQQSYNQRRSDVVEGVMSDLQRAETNILIDSDGSDEAAKILKIL
ERSAEPEILMAGMSSKQLNSLSVYQAKLEETRQSNMHQSIEKALEDSGLSGRDVTPFMRL
SIVGLATKICQGKCYPKKGLITIWKPTEQQKIELVEGRAYAISGLVAFNLDSDTLYLQAR
GSTTKLLQLSSSAIEHYQPFFNPRKSISLYNFDDVPLSSEFDIAGLVVFVGEVFETANQR
KQWIFMTDCSVHESHSRRPFSNLLAINFCALSTGHDSYVPISHNLVGSTVGFCNIIKKEK
DRMNHIWVGETTENSDYSLTYEHKRYIHLKDAAVASQKWAKVSSLTIEKLKQKVFSIVGK
RT
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgtggcagcttcactccgatgccgaaaataatatccggtggagtcacctctcc
gatgatccccaaatccaagtccaaatcgccgcgcctactcaaatacaccgtagttttgct
tccatttccgatttatcgcttcaaggttatgccaagttaaaggagagagatagtagtaat
aatgtgaatgagtcgggttatcagatgttccggaccgggtcgggtaagccagtagttgtg
aatcaatcctcgttatcgaaagcatcagctattctacgcgatgtcgtaacggatcaagta
tgtccaaacttcactggaaatgttggaggacctcttacaagcccttcaacgtttcgaaat
ggatttaggaattcacttgctataaaaaagtctgctctttcaaaagcttcatctccttgc
agcaatgaaactgaggctaccatggatatgggtagcgggatcactgtagatacagattat
tcgaagatgaaggagagccatactaataatgtgaatgagtcgcgttatcaggtattctgg
accgggccgggtaagcccgtagttgtgaatcaatcttcattatcaaaagcatcagctatt
cttggtgacgtcttattggatcaaggatgtccaaagttcaccggaaatgttggaggacct
ctgagaagcccttcaacttttcgaaatggattcagaaattcacctgctttgaaaaagtct
cctctttcaaaggcttcatctcttctcagcaatgaaaatgaggctaccgtgaatactagt
agcaggggtactgtagattcaggtcaagtaaaagaaataaatagaggatgtgacttggga
aattcaatgttccagactgggtcagggaaaacagtaaatatatctacctcaggtcttgct
agagcccaaaaattattgtgcttgaaagatgaacagactcatcaaggttttgaagaaatg
acgcagcagttacatgtcagagccagtaatcggcaaagtttgcctcatttgggtatgaaa
atggggattgctgacaagcagtcaaaagacagcatttcgagtctaatatctcctcttaag
gtaaggtctgaaacatcaagcagtaaactgatggaggttactccagatagtctgcattct
atttcaaagccttcttctattaagtttcatactgctggtggaagatctatattagcttct
agtaattccttgcaacgtgcaaggagccttctcggagaccccgagttgggaagttttatg
aatgaaggggatgctggtgagcctgtcttttccatttataaagacaaaaaaccagaactg
aattcaaacaaattatattgcttagattcacgcgtttcagaccaacactcagtaacaaga
aaacaagtgtcaaaggacttcatatctccactgcgtccggcttcttaccaaaaagaatcc
tttgttaatgtaggttcggggaaaaacctgattggaaattttgatgcagtggtccatgaa
agcactggttataatgacgtgaagggcttccgtaactatcccttttcctccgttaaaata
gctcctgaccgtagtctaactggtactggtttcctaaatggcctacataaaaagccacca
ggttttccagaagttaatatctcaaacaccattgacatgggtaataaaattaacaagcaa
gctgtggctgtaaagagagtatcagagaggaggagctctggttctttcaagaggccccgc
atttcaaaatttatcacccccttcaacaatgaaattccattagttgaaaatggttcacta
gtcttagctcctgaagaatcttcttacaagaataaggtttctagtaggtacccataccag
gcttctcgaaagtatgtcaaagagtattttggggtgccaccatccgtcaataccatgttg
gagcatttgccggcatgtattagaacaatgaatccagatcgggcagagcaacattgtttc
cctggtgaatgtggatttaatagtattggcaaagaagctttttatatgatgttgatgcaa
tttggagcttccatgaaacatatttcagaaacttgggtatccaatcactataaatggatt
atctggaagctagcatgctacgaaagatgttatcctgggagatatctgactgtaagtaat
gtcatggaagaactgaaatacagatacgagagagaagtaaatcatggacaccgatcagca
attaaaaaaatcttagaaggagatgcaccaccgtcttctgtactggtactatgcatatca
tccgtccagacaaatactgaggcaatgttcgaaaatatctcaacgtcacgcggatttgat
agaagtatagttgcaaatgtggaattaacagatgggtggtattcggtaaatgctgtactg
gatgcaccattgtctaaaaagctggcctctggaaaactgtttgtcggacaaaaacttaag
atctcaggagctggactatgtggctgggttggcccaatttcaccccttgaggcgtcaacc
acagttagcttggttctgcacattaatggaacttatagaactcattgggctgatcgtttg
ggcttctgcaagactggatgtgctccgttagcatttaattgcatcaagagtggcggagga
gcagttccgtgcacaattattggaatacaaaggatataccctgttctgtatagggaacgg
ttaagtgacggggaatacactgtaagatcggagaggatggaagctaagatgcaacagtca
tataaccagaggcgctctgatgttgtagaaggagtcatgtccgatttacagagggcagaa
acaaatatccttatagatagtgatggtagtgacgaagcggcaaaaatccttaaaattctc
gaaagatctgctgaaccagaaattctgatggctgggatgagttcaaagcaactaaattct
ttgtctgtttatcaagcaaaactagaggaaacaaggcagtcaaacatgcatcaatctatc
gaaaaagctctagaagattctggtctaagtgggagggacgtcaccccatttatgaggttg
agcatagttgggttagccactaaaatttgtcagggaaagtgttaccccaagaaaggcttg
attacaatatggaaaccgactgagcaacagaaaatagagttggttgagggacgtgcatac
gctatttcaggacttgtagcattcaacttagattcagataccctttacttgcaagcccgg
ggatctaccaccaaattgttgcagttatcttcctcagctattgaacattatcagcctttt
tttaacccaaggaaatctatctcgttgtacaatttcgatgacgttcctctctccagtgaa
tttgatattgctggacttgttgtttttgtgggagaggtgtttgagactgctaatcaaaga
aagcaatggattttcatgacagattgctctgtacatgaatcacattccagaaggccattc
agtaatttgcttgcaataaacttctgtgcactatccactggtcatgattcgtatgtacca
attagccataaccttgttggatcaacggttggtttctgtaatatcattaagaaagaaaag
gaccgaatgaatcatatttgggtgggagaaaccacggaaaattcggactactccttaact
tatgaacataaaagatatattcacctgaaagatgctgctgttgcttctcaaaagtgggct
aaagtctcaagtttgactattgagaaactgaagcagaaggtattttctattgttggtaag
cgtacatag
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