Apium graveolens (celery): 141708198
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Entry
141708198 CDS
T11340
Name
(RefSeq) putative pectate lyase 11
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141708198
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141708198
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141708198
NCBI-ProteinID:
XP_074367800
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Position
2:237770056..237772258
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AA seq
404 aa
AA seq
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MSSLAFSFILLCFLSTLFLLASCSPFQDPELVVEDVHRSINNASRRKLGYLSCATGNPID
DCWRCDHNWEQNRYRLADCAIGFGKNAIGGKDGKIYVVTDSGNDDPVNPRPGTLRHAVIQ
DEPLWIIFKRDMVIKLKQELVMNSFKTIDGRGASVHIANGPCIKIHYVTNIIIHGIHIHD
CKQGGSAMIRDSPHHSGRWTVSDGDAVSILGGSHIWVDHCSLSNCEDGLVDAIHGSTAIT
ISNNYMTHHDKVMLLGHSDSYTEDKKMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSAAPTINSQGNRFLAPNLRSNKEVTKHEDAGEGEWRHWNWRSEGDLMLNGA
YFRQSGASSHSFARASSLNARPSSLVASITTSSGALNCRKGSHC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcttagctttctcattcatcctcttgtgtttcctctcaactctgtttctactt
gcttcatgttcaccatttcaagaccctgaacttgtagtagaagatgtccacaggagcatt
aacaatgcctcgaggaggaagctaggatacctttcgtgtgcaacaggcaaccctatcgac
gattgttggcgctgcgatcacaactgggaacagaaccgttatcgtttagcagattgtgct
attggcttcgggaagaatgcgattggaggaaaagatggcaagatttatgtggtcaccgac
tcgggcaacgatgatccggtgaacccgaggccaggcacgctaagacatgcagtgatacaa
gatgagccattgtggatcatattcaaaagagacatggtaattaagttgaagcaggagctt
gttatgaactcgttcaagacaattgatggcaggggagctagtgtccacattgctaatgga
ccatgcattaagattcactatgttactaatattattatccacggcattcatattcatgat
tgtaagcaaggagggagtgccatgataagagactcaccgcaccattctggacggtggact
gtatcggatggtgatgcagtgtcgattttaggagggagtcatatttgggtagatcattgt
tcattgtcgaattgtgaagatggactcgtggatgcgattcatggatccacggctattacg
atttctaacaactatatgacacatcatgacaaggttatgttgctggggcacagcgattcg
tatacagaagacaaaaaaatgcaggttaccattgcttttaatcattttggtgaaggcctt
atccagaggatgcctaggtgcagacatggttacttccatgtggtgaataatgactacact
cattgggaaatgtatgcgattggggggagtgcagcccctaccataaatagccaaggaaat
agatttctggcacccaatctcagatctaataaagaggtgacaaagcatgaagatgcaggg
gagggagaatggagacactggaattggaggtcagaaggggatttaatgctgaatggggca
tacttcaggcagtcaggggcatcgtctcactcgtttgcaagagcgtcaagcttaaatgca
agaccatcgtccctcgtggcttctattactacttcctctggtgcacttaattgcagaaag
ggttctcactgctag
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