KEGG   Apium graveolens (celery): 141711097
Entry
141711097         CDS       T11340                                 
Name
(RefSeq) uncharacterized protein LOC141711097
  KO
K12828  splicing factor 3B subunit 1
Organism
agrv  Apium graveolens (celery)
Pathway
agrv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agrv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141711097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:agrv03041]
    141711097
   03036 Chromosome and associated proteins [BR:agrv03036]
    141711097
Spliceosome [BR:agrv03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    141711097
 Complex B
    141711097
 Complex C
   U2 SnRNP specific factors
    141711097
Chromosome and associated proteins [BR:agrv03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    141711097
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_MROH2B_C TPR_DNAAF5 HEAT_EZ HEAT HEAT_EF3_N TPR_IPO5 HEAT_2 HEAT_ECM29 Htt_N-HEAT_1 Vac14_Fab1_bd XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 141711097
NCBI-ProteinID: XP_074369636
LinkDB
Position
3:complement(284025531..284028759)
AA seq 1005 aa
MEGLKRKRGESSRWDETTEVNAGAMTPGAGMTTWDDAMSTPTPKRQRSRWDETPAADMGS
ATPMECNKAATAYYTPVGGVELATPTPGAININYLLSDQELDSMFPEKGYTILDPPASYV
PIRTPARKLIATPTPMATPLYAIPEENRGQQFDVPKELPGGLPFMKPEDYQFFGALLNEE
DEEEDKLSAEEQKGRKIMKLLFKVKNGTPAQRKTALRQLTDKAREFGAGQLFSQILPLLM
QPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDQDYYARVEGREIISNL
SKAAGLPTMISAMRPDIDNIDEYVRNTTARAFSVVASALGIPAIFPFLKAVCQSKKSWQA
RHTGIKIVQQIAILIGCAVLPHLRSLVEIIQHGLNDENQKVRTITALSLAALAEASAPYG
IESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAVYASYYTKEVMIILIREFQSP
DEEMKKIVLRVVKQCVSTEGVEANYIRSEMLPEFFRNFWVRRMALDRRNYKQLVETTVEI
GNKAGVADIVGRIMEGLKDESEPYRGMVMETIGKVIADLGASDIDARLEELLIDGMLYAF
QEQTSDDSNVMLNGFSAVVNSLGKRVKPYLLQICGTIKWRLNNKSAKLRQHAADLITRVA
VVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNSIGMSKMTPPIKDLLPR
LTPILKNRHEKVQENCIDLVGRIADRGAEFIPAREWVRICFELLEMLKAHKKGIRRATVN
TFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYGVP
ELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLVDALMDRDLVHRQTAASAVKHMALGV
AGLGCEDALVHLMNHVWPNIFETSPHVINAVMEAIEAMRVALGAAVVLNYYLQGLFHPAR
KVRQVYWKLYNSLYIGAQDAMVAAYPSLYDEERNIYSRTELTMFV
NT seq 3018 nt   +upstreamnt  +downstreamnt
atggaaggtctgaagagaaagagaggagagtcatccaggtgggatgagactacagaagtt
aatgctggtgcaatgactcctggcgctggaatgacgacttgggatgatgctatgtcgacc
ccaacaccaaaacgacagaggtcaaggtgggatgagacacctgctgcagacatggggagt
gcaacaccaatggagtgcaacaaagctgcaactgcttattatacaccagtgggaggagtt
gaacttgctaccccaacaccgggggctattaacattaactacttgctgagtgatcaagaa
ctcgactcgatgttcccagagaaaggatatacaattttagatcctccggcttcatatgtg
cctatcagaacacctgctaggaaactcattgctacccccactccaatggcaactccactt
tatgcaattcctgaagagaatagaggtcagcaattcgatgttcccaaggaattgccaggc
ggtttgccattcatgaagcccgaagattaccagttcttcggagctttgctgaatgaggaa
gatgaagaagaagataaactgtctgctgaggagcagaaagggcgaaaaattatgaaattg
ttgtttaaggtgaagaatggaacaccggctcagcgtaaaacggctttgagacagcttact
gataaggccagggagtttggtgctggccaattgtttagtcagatactgccgcttctcatg
caacctaccttggaagatcaggagaggcatcttttggtcaaggtcattgacagagtatta
tataaactggatgatttggtacgtccttatgtacacaaaatccttgtggtgattgagcct
ttattaattgatcaagactattatgctcgtgtagagggaagagaaattatatccaatctc
agcaaagcagctggcctgcctacaatgatttctgcaatgcgtcctgatattgataacatt
gatgagtatgtgaggaacaccactgcgagagccttcagtgttgttgcttctgcactaggg
atacctgccatttttccattcttgaaagctgtatgtcaaagtaagaagtcatggcaagct
cgtcacacgggtattaagattgttcagcaaattgctatactgataggctgtgcagttctt
cctcacttgcgttctcttgtagaaattatccaacatggtctgaatgatgagaatcagaag
gtcagaactattacggctctgtctttagcagctcttgcagaggcctctgctccatatggt
attgaaagctttgactcagttttgaagccgctatggaagggtattaggtcacaccgtggg
aaagtcttggctgctttcttgaaggcaattggtttcattataccactaatggatgcggta
tatgcaagttactatacaaaagaagtcatgattatcttgatacgtgagtttcagtcaccc
gatgaggaaatgaagaagattgtgttaagagtggttaagcagtgtgttagcactgaaggt
gtagaggctaattatattcgaagtgaaatgttgcctgaatttttccgcaatttttgggtt
aggaggatggctttggatcgtagaaattataaacagcttgttgagactactgttgaaata
ggaaacaaagctggagttgctgatattgttggacgaataatggagggccttaaagatgag
agtgaaccgtataggggaatggttatggagacaatcgggaaggtgatagcagacctgggt
gcatctgatattgatgctcgattggaagagcttttaattgatggcatgctttatgcattc
caagagcagaccagtgatgattctaatgtgatgcttaatgggttcagtgcagtagtgaat
tctttagggaagagggtgaagccttaccttcttcagatatgtggtacaattaagtggcgt
ctgaacaacaagagtgcaaagcttagacagcatgcagcagatctcattacacgggttgca
gtggtcatgaaacaatgccaggaagagcaacttatgggacatcttggggttgttttgtac
gagtatttgggagaagaatatcctgaagtcttgggatcaatactgggagcactaaaagca
attgtgaatagtattggtatgtctaaaatgactcctccaatcaaagatttgcttccacgg
ttgaccccaattttgaagaataggcatgagaaggttcaggagaactgtattgatcttgtt
ggtcgaattgctgatcgtggagctgagttcattcctgctagggagtgggtgaggatatgc
tttgagcttcttgagatgcttaaagcccacaaaaagggaattcgtcgagctacagtgaat
acttttgggtacattgcaaaagctattggaccacaagatgttctggcaaccttgttgaac
aatctcaaggttcaggaacgccagaatcgcgtgtgcacaactgtggcaattgcaatagtt
gcagaaacttgttcaccttttacagtgttacctgccttgatgaatgagtatggtgttcct
gagctaaatgtgcagaatggtgttctgaaatctctctcctttcttttcgagtacattggt
gaaatgggtaaagattacatatatgccgtgactccattacttgtagatgctctgatggac
agggatctggttcacaggcagaccgctgcatcagccgtcaagcacatggctctgggtgtg
gctggtctgggatgtgaggatgcattggttcacttgatgaaccacgtctggcccaacata
tttgagacttcaccgcatgtcataaatgctgtcatggaagccattgaagcgatgagggtt
gcattaggcgcagctgttgtacttaactactatcttcaggggttgtttcatccagcaaga
aaggttagacaagtatactggaagttgtacaactcactctacattggcgctcaagatgca
atggtggctgcttatccttcactttatgatgaggagcgaaacatctacagccggactgaa
ttgactatgtttgtgtaa

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