Apium graveolens (celery): 141718123
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Entry
141718123 CDS
T11340
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141718123
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141718123
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141718123
NCBI-ProteinID:
XP_074376592
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Position
4:82974644..82976584
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AA seq
495 aa
AA seq
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MGITERSIFIILVISTAAFYTLQAEGDNVDGKNKANETKNAVKAQAPSLAPAPDGPAPSP
QDSANTPNPYPSDESEYAMMSELFSPEEVPGENEADSAVEAAAPGQEESSEENEPDPADP
PPSIQTQNSTRRVLARNHRGPCIAYNPIDRCWRCDPNWARDRKRLAGCALGFGRRTTGGR
DGPIYKVTDPSDDNVMEPRPGTLRHAVIQTTPLWIIFTKSMTITLKQELLMQCDKTIDGR
GKNIKISGGAGISIQFVRNIIIHNIHITDIIVTPGGTIRDSVDHIGIRAQPDGDAISIFG
SSDIWIDHVSASNAKDGLIDVVAASTGITISNCHFVRHDKVMLFGAEDNNERDKNMQVTV
AYTHFGKHLIQRMPRVRWGFFHLVNNDYTHWLMYAIGGSCGASIISQGNRFIAPPDPVAK
EVTHRTNGLEPGWETWNWRSEGDLMMNGAFFVESGSPNWRMGIDPLDLIIPAPAAEVTTL
TLFTGPLGCRKKRPC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggggataaccgagcggtcgattttcataattttagtaattagcactgctgcattctat
acacttcaggcagagggcgacaatgtggacgggaagaacaaagccaatgaaaccaagaat
gctgtcaaggctcaggcaccgagcctcgcgcctgctccagatggacctgcccctagtcca
caagattctgcaaatactcctaacccttatccatccgacgaatctgagtacgccatgatg
tctgagttatttagtccagaggaagttccaggagaaaatgaagctgatagcgccgtcgag
gctgcggcacctggtcaagaggaaagttcagaagaaaatgaacctgatccagcagaccct
cctccatctattcagacacaaaacagtacaagaagagtactagccaggaatcaccggggg
ccatgcatagcctacaatcccatcgacaggtgttggagatgcgaccccaactgggcaaga
gatcggaaaagattagctggctgtgcactgggctttggtcgccgcactactggtggaaga
gatggaccaatctacaaagtcaccgacccctcagacgacaacgttatggaacctaggccc
gggaccttacgccatgctgtgattcagaccacgccattgtggattatattcaccaagagc
atgacaattacgctaaaacaagagttgttaatgcaatgtgacaaaacaattgatggccgc
ggaaagaatattaaaattagcgggggtgctggtattagcattcagtttgttagaaacatt
ataatacataacattcatattaccgatattatcgtcactcctggtggaacaatcagggat
tccgtggatcatatcggtataagagcacaaccagatggtgatgcaatttcaattttcggt
tcatccgatatatggattgatcatgtttctgcatctaatgctaaagacggccttattgat
gttgtcgcggcttctactggtataaccatttctaactgccatttcgtccgtcatgataag
gtgatgttatttggtgcggaagacaacaacgaaagggacaaaaacatgcaagtaacagtg
gcatatacacattttggaaagcatttgatacaaagaatgccgagagtgagatggggattt
tttcatttggtaaacaacgattacacacattggctaatgtacgcgattggaggtagctgc
ggtgcatctatcattagccaggggaacaggttcatagctccacctgatcccgtagccaaa
gaagtaactcacagaactaatggacttgaaccaggttgggagacatggaactggagatca
gaaggtgatttgatgatgaatggagctttcttcgtggagtctggaagtccaaactggaga
atgggaattgatccactggatttgattattcccgcaccagcagctgaagttactacgctt
actctgttcacaggcccgcttggttgcagaaagaagagaccttgctag
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