Agrobacterium sp. 33MFTa1.1: EYD00_03455
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Entry
EYD00_03455 CDS
T05906
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EYD00_03455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agt03021
]
EYD00_03455
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_03455
Enzymes [BR:
agt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EYD00_03455
Transcription machinery [BR:
agt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EYD00_03455
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EYD00_03455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
QBJ12536
LinkDB
All DBs
Position
circular:680109..680498
Genome browser
AA seq
129 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLASHRARQISQGSSITVDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPVTLAAAAADSEEDDQPETVTFDQMSEEELLAGIEGL
VPPEKNDDY
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcacagttgaagattgcattgataaagtagacaaccgtttcgagctggtg
cttctcgccagccaccgtgcgcgccagatttctcagggctcttccatcacggttgaccgc
gataatgacaagaaccccgtcgttgcgctgcgtgaaatcgccgacgagacgctgtctccc
gacgatctgaaggaagacctcatccattcgctgcagaagcacgtggaagtggacgagccc
gagcccgatccggtcacgcttgccgccgccgctgccgacagcgaagaagacgaccagccg
gaaactgtcaccttcgaccagatgtcggaagaagaactgctggccggtatcgaaggcctt
gtgccgccggaaaaaaatgacgattattga
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