KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_12610
Entry
EYD00_12610       CDS       T05906                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Pathway
agt00230  Purine metabolism
agt00240  Pyrimidine metabolism
agt01100  Metabolic pathways
agt01232  Nucleotide metabolism
Module
agt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
agt_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:agt00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    EYD00_12610 (nrdE)
   00240 Pyrimidine metabolism
    EYD00_12610 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agt03400]
    EYD00_12610 (nrdE)
Enzymes [BR:agt01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     EYD00_12610 (nrdE)
DNA repair and recombination proteins [BR:agt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    EYD00_12610 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: QBJ14152
LinkDB
Position
circular:2529459..2531645
AA seq 728 aa
MDTLTASTLRKDTKQPTAASQTPLDAGLDYHALNAMLNLYDENGKIQLDKDRLAARQYFL
QHVNQNTVFFHNLREKLDYLVAEGYYEQEVLDQYSFNFVRDLYDEAYARKFRFPTFLGAF
KYYTSYTLKTFDGKRYLERYEDRVCMVALSLARGDEQLARNLVDEIISGRFQPATPTFLN
AGKKSRGELVSCFLLRVEDNMESIGRSINSALQLSKRGGGVALSLTNIREAGAPIKQIEN
QSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIMRFLDTKRENADEKIRIKTL
SLGVVIPDITFELARNNEDMYLFSPYDVERVYGVPFTEISVTEKYHEMVADSRIRKKKIK
AREFFQVIAEIQFESGYPYIMFEDTVNRANPIAGRISMSNLCSEILQVSEASAFNADLSY
SHMGKDISCNLGSLNIAAAMDSADFGKTIETSIRALTAVADMSHISSVPSVEKGNDESHA
IGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTVTYHAIRASNRLAVERGQSFKGFENS
KYASGEYFDKYTDREWLPATEKVRDLFEKAGIAIPTQEDWKVLKQEVMASGLYNQNLQAV
PPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVYYPASYLSNDNLEYYQDAYEIGPEKI
IDTYAAATQHVDQGLSLTLFFRDTATTRDINRAQIYAWKKGIKTIYYIRLRQMALEGTQV
QGCVSCTL
NT seq 2187 nt   +upstreamnt  +downstreamnt
ttggacacgctgaccgctagcacgctgcgcaaggacaccaaacagccaacagccgcaagc
cagacgccgctcgatgcaggcctggactaccacgcgctgaacgcgatgttgaacctttat
gacgagaacggaaaaatccagctcgacaaggatcgtcttgctgcccgtcaatatttcctc
cagcacgtcaaccagaacacggtgtttttccataacctcagggaaaagctcgattatctg
gtagcggagggttactacgaacaggaggtgctggaccagtattccttcaatttcgttcgt
gacctctatgacgaggcctatgcccggaagtttcgctttccgaccttcctcggtgcgttc
aaatattacacctcctacacgctgaagaccttcgacggaaaacgttatctggagcgttac
gaggatcgcgtctgcatggtggcgctttcccttgcgcgcggtgatgagcagctggcacgc
aatctggtcgacgagatcatttccggccgcttccagccggcgaccccgacgttcctgaac
gcgggcaagaagagccgcggcgagctggtctcctgtttcctgctgcgcgtggaagacaat
atggaaagcatcggccgctccatcaattcggcgctgcagctctccaagcgcggtggcggc
gttgccctttcactgaccaatattcgcgaggctggcgcgccgatcaaacagatcgaaaac
cagtcctccggtgtcatacccgtgatgaagctgctggaagattcgttttcctatgccaac
cagctcggcgcccgccagggtgcgggtgctgtctatctgcatgcccaccaccccgacatc
atgcgtttcctcgataccaagcgtgaaaacgccgacgaaaaaatccgcatcaagaccctg
tcgctcggcgtcgtcatccccgacatcaccttcgagctcgcccgcaacaacgaggatatg
tatctgttctctccctatgatgtggagcgggtctacggcgtgcccttcaccgaaatctcg
gtgacggaaaaataccacgagatggtcgccgacagccgcatccgcaagaagaagatcaag
gcgcgcgaattcttccaggtgatcgccgaaatccagttcgagagcggttatccctacatc
atgtttgaggatacggtgaaccgcgccaatccgattgccggtcgcatcagcatgagcaat
ctctgctcggaaatcctgcaggtcagcgaagcgagcgcgttcaacgccgatctctcctat
agtcacatgggcaaggatatttcctgcaatctcggttcattgaatatcgccgcggcaatg
gattcggccgatttcggcaagaccattgaaacctccatcagggcactgacggcggtggcg
gacatgagccacatctcctccgttccgtctgttgaaaagggaaatgacgaaagccatgcc
atcgggctcggtcagatgaacctgcacggttatctggcgcgcgagcgcatcttttatggc
tcggaggaaggcatagatttcaccaatatctatttctacaccgtgacgtatcacgctatc
cgcgccagcaaccggctggcggtggaaagaggccagagcttcaagggctttgaaaactcc
aaatatgcctcgggcgaatatttcgacaaatataccgaccgggaatggttgcccgcgacg
gagaaggtccgcgacttgttcgaaaaggccggtatcgccattccgacccaggaagactgg
aaggtcttgaagcaggaggtcatggcatcaggcctctataaccagaaccttcaggccgtg
ccgccgacaggctcgatctcctatatcaaccactccacatcctccattcatccgatcgtt
tcgaagattgaaatccgtaaagagggcaagatcggccgagtttattacccggcttcttat
ctctcgaacgacaatctcgagtattaccaggatgcctatgagattggccctgaaaagatc
atcgacacctatgcggcggctacccagcatgtcgatcagggcctgtctctgacgctgttc
ttccgtgatacggccacgacccgcgacatcaaccgggcacagatttatgcctggaagaag
ggcatcaagaccatctactacatccgtttgcgccagatggcgctggaaggcacgcaggtt
cagggctgcgtttcctgcacgctctga

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