KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_13600
Entry
EYD00_13600       CDS       T05906                                 
Name
(GenBank) 2'-5' RNA ligase family protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:agt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:agt03016]
    EYD00_13600
Enzymes [BR:agt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     EYD00_13600
Transfer RNA biogenesis [BR:agt03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    EYD00_13600
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: QBJ14327
LinkDB
Position
circular:complement(2727059..2727775)
AA seq 238 aa
MSFELTDNGGSGQLFLEGFDLEKQRRVNPRFGNKVLIVLKPPVALAERIFTDASCHAAGR
TKRAAHPAELLHITLLCVGCFDTVPRSFANRLKAALGEIRARPVPITFDGSSLFGNRSCL
ALSSRREMLELRALAKMVQRALWRANLPFVAASSFTPHLTVVYGCGKIDIMPVEKPYSWL
AGSFELIFSHNGETRHESLGRFPLSAKADRYEQPESQLYLPEKIFRPQKRSAHKMAAR
NT seq 717 nt   +upstreamnt  +downstreamnt
gtgagtttcgagttgacggataatggagggtcagggcagcttttcctcgaaggcttcgat
ctggagaagcagcgacgggtcaatccgcgatttggcaacaaggtcttgatcgtgctgaag
ccgccggtggccttggcggaaagaattttcaccgatgcatcgtgccatgccgccgggcgg
acgaagcgggcggcccatccagccgagcttctgcatatcaccctcctttgcgtcgggtgt
ttcgacaccgtgcctcgcagtttcgcaaaccggctgaaggcggcactgggggaaataagg
gcgcgtcccgttccgattacattcgatggcagctcgcttttcggcaatcgcagctgtctg
gcgctaagcagccgccgcgagatgctggagctcagagcattggcgaagatggtgcagcgc
gcgctttggcgggccaatctgccctttgttgccgcatcgtcgttcacgccgcatctcacc
gtggtctatggctgcgggaaaatcgatatcatgcctgttgaaaaaccatatagctggctg
gcgggcagcttcgaactcatcttcagccataatggagagacgcggcacgaatctctcggg
cgcttcccgctttcggcgaaagcggaccgctatgagcagccggaaagtcaattatatctg
ccggaaaaaatattcaggccgcagaagcggtcggcgcacaagatggcggcacgataa

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