Agrobacterium sp. 33MFTa1.1: EYD00_22095
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Entry
EYD00_22095 CDS
T05906
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt00540
Lipopolysaccharide biosynthesis
agt01100
Metabolic pathways
agt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EYD00_22095 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
agt01005
]
EYD00_22095 (rfaD)
Enzymes [BR:
agt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
EYD00_22095 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
agt01005
]
Core region
EYD00_22095 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
HEPN_MAE_28990
Motif
Other DBs
NCBI-ProteinID:
QBJ16073
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All DBs
Position
linear:1820417..1821403
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AA seq
328 aa
AA seq
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MYIVTGAAGFIGSNIVADLEAAGLGPIAVVDWFGRGDKWRNLAKRNIAAYVSPEGLPEYL
RGLKMEVKAVIHMGAISATTEADVDRLIDLNINYSVMLWDWCAEHGVPFIYASSAATYGG
IEDGFDDNESSAARAGLAPLNAYGWSKKTTDDIFVERVARGENAPPQWVGLKFFNVYGPN
EYHKDDMRSVACKLFDVVQTTNEVSLFKSYRPDIAHGEQRRDFVYVKDCTSFILWLLHNR
NRSGIFNCGSGKARSFADIVHVMGDILGKKLNINFIEMPEAIRGKYQYFTEANMSKVASI
GYNGPQSSLEEGLNDYINSYLRHDDRYR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtatattgtaactggggcggctggatttattgggtcaaacattgtcgctgatttggaa
gcggcgggtctgggaccaatcgccgtggttgactggttcgggcgcggtgacaagtggcgc
aacctagcgaagaggaacatcgcggcttatgtttctcctgagggattgccggagtatctt
cgcggcctaaagatggaagttaaggctgtgatccacatgggcgcgatctcggccaccact
gaagctgacgtagacagactgatcgatctaaacattaactattcagttatgttgtgggat
tggtgcgctgagcatggtgtcccattcatttacgcatcttccgctgcgacctacggcgga
atcgaggatggatttgatgataatgagtcatccgccgctcgagcgggcctggcaccgcta
aatgcgtatggctggagcaaaaaaacgacagatgatatttttgtcgaacgtgtcgcccga
ggtgagaatgctcccccccaatgggttggtctgaaattctttaatgtgtatggccccaac
gagtaccacaaggatgacatgcgcagcgtagcctgcaagctctttgacgttgtgcagact
acgaatgaggtctccctattcaaatcctatcgacccgacatcgcccatggcgaacaacgt
cgcgactttgtctatgttaaagactgcacgtctttcattctttggcttttgcacaataga
aaccggagtggaatattcaactgcggatccggcaaggcgaggtcgttcgcagatatcgtc
cacgtcatgggggatattttaggcaagaaactgaatataaacttcattgaaatgcccgag
gccattcgtggaaaatatcagtatttcacggaggcaaatatgtcgaaagtggcatcgata
ggctataacggcccgcagtcgtcgctggaagaagggctaaatgactacattaatagttat
ctacggcatgatgacaggtatcggtaa
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