Agreia sp. COWG: AGREI_1542
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Entry
AGREI_1542 CDS
T07018
Symbol
uvrB
Name
(GenBank) excinuclease ABC (subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
agx
Agreia sp. COWG
Pathway
agx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGREI_1542 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agx03400
]
AGREI_1542 (uvrB)
DNA repair and recombination proteins [BR:
agx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AGREI_1542 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AGREI_1542 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_16
AAA_5
AAA_30
AAA_22
DUF87
HAMP
Motif
Other DBs
NCBI-ProteinID:
CAD5998156
LinkDB
All DBs
Position
COWG:complement(1511114..1513180)
Genome browser
AA seq
688 aa
AA seq
DB search
MEPTRSVRPFEVISEYTPSGDQPTAIAELTARINAGETDVVLLGATGTGKSATTAWLIEA
VQRPTLVLAHNKTLAAQLANEFRELMPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDSSI
NSEVERLRHSTTNSLLSRRDVIVVSTVSCIYGLGTPEQYMNAMIALQVGQRVDRDWLVRK
FVSMQYNRNDVDFSRGNFRVRGDTIEIIPQYEELAIRIEMFGDEIEALYSLHPLTGDIVK
KLDSVSVFPGSHYVTDTDVMQRAIGTIQQELELRVGQLEREGKLLEAQRLRMRTTFDLEM
MQQIGFCSGIENYSWHMDVRPPGAAPHCLIDYFPDDFLVVIDESHVTVPQIGAMYEGDSS
RKRTLVDHGFRLPSALDNRPLKWPEFKERVGQTVYLSATPGKYEMGIADGVVEQIIRPTG
LIDPEIVIKTSTGQIDDLLEEIRIRAAKDERVLVTTLTKKMAEELTDFLGEHGVKVRYLH
SDVDTLRRVELLTELRAGLYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSTSLIQ
TIGRAARNVSGQVIMYADKVTDSMAFAISETTRRRELQVAYNTEHGIDPTPLRKRIADIT
DVLAREGADTAQLLAGRDNKKKSPTPNLRREGIAAQGANQLEAIIFDLNEQMLQAAGELK
FELAARLRDELGDLKKELRQMSAAGHLS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacccgctctgttcgccccttcgaagtcatcagcgaatacactccgagcgga
gatcagcccaccgccatcgccgagctgacggcccgtatcaacgccggggaaaccgatgtg
gtgctgctcggtgccacaggcaccggaaagtcggcgacgaccgcgtggctcatcgaagcc
gtgcagcgccccactctggtgcttgcgcacaacaagacactggcggcacagctggcgaac
gagttccgcgagctcatgcccaacaatgcggtcgagtacttcgtgtcgtactacgactac
taccagccagaggcctacgtgccacagacagacacctttatcgagaaagacagctcgatc
aactccgaagtcgagcggctacgtcactccaccaccaattccctgctgtcgaggcgcgac
gtcattgtggtctccacagtgtcgtgcatctacggtctcggtacgcccgagcaatatatg
aacgccatgatcgccctgcaggtgggccaacgggtcgaccgcgactggctcgtgcgcaaa
ttcgtctcgatgcagtacaaccgcaacgatgtcgacttctcacgcggcaacttccgcgtg
cgcggcgacacgatcgagatcatcccgcagtacgaagagctggcgatccgcatcgagatg
ttcggcgatgagatcgaggccctgtacagcctgcacccgctcaccggcgacatcgtcaag
aagctcgactccgtgtcggtcttccccggctctcactacgtcaccgacaccgacgtcatg
cagcgcgctatcggcaccattcagcaagaactcgagctgcgggtgggacaactcgagcgc
gagggcaaactgctcgaggcacagcgcctacgcatgcgcaccacgttcgatctcgagatg
atgcagcagatcggcttctgttccggcatcgagaactattcgtggcacatggacgtgcgg
ccaccaggcgccgcaccgcactgcctcatcgactacttccccgacgacttcctcgtcgtc
atcgacgaatcccacgtcaccgttccccagatcggggccatgtacgagggggactcgtcg
cgcaagcgcaccctggtcgaccacggcttccgtcttcccagcgcactcgacaaccgcccc
ctcaagtggccggagttcaaggagcgggtggggcagaccgtctacctgtccgcaacaccg
ggcaagtacgagatgggcatcgccgacggagtcgtcgagcagatcatcaggccgacgggc
ctcatcgaccccgagatcgtgatcaagacctccaccggccagatcgacgaccttctcgag
gagatccgcatccgggccgcaaaagacgagcgtgtgctcgtcacgacgctcacgaagaag
atggcggaagagctcaccgacttcctcggtgagcacggggtgaaggtgcgttacctccac
tccgacgtcgacaccctgcgtcgcgtcgagctcctcacagagcttcgtgccggcctctac
gacgttctcgtgggcatcaacctgttgcgagaaggcctcgacctgccagaagtgtcactc
gtggccattctcgacgcagacaaagaggggttcctgcggtcgtcgacctcgctcatccag
accatcggccgcgccgcccgtaacgtgtcaggccaggtgatcatgtacgccgacaaggtg
acagattccatggctttcgccatcagcgagaccacgcgtcggcgcgaacttcaggtcgcg
tacaacacagaacacggcatcgaccccacgccgctgcgcaagcgcatcgccgacatcacc
gacgttctcgcccgtgagggtgcagacacggcccagctgctcgccgggcgtgacaacaag
aagaaatccccgacgcccaacctgcgccgcgagggtatcgccgcgcagggggccaaccag
ctcgaggccatcatcttcgacctgaacgagcagatgctccaggccgccggcgaactgaag
ttcgagctcgcggcccgtctccgcgacgagctgggcgacctcaagaaagagctccgtcag
atgtcggcggcggggcacctctcttag
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