Aeromonas hydrophila YL17: AI20_19380
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Entry
AI20_19380 CDS
T03186
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahd03032
]
AI20_19380 (gyrB)
03400 DNA repair and recombination proteins [BR:
ahd03400
]
AI20_19380 (gyrB)
Enzymes [BR:
ahd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AI20_19380 (gyrB)
DNA replication proteins [BR:
ahd03032
]
Prokaryotic type
DNA Topoisomerases
AI20_19380 (gyrB)
DNA repair and recombination proteins [BR:
ahd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AI20_19380 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
DUF6865
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHV37254
LinkDB
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Position
complement(1132182..1134593)
Genome browser
AA seq
803 aa
AA seq
DB search
MSENTYDSSNIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCSDI
QVKIHSDGSVSVRDNGRGIPVDIHPEEGRSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSDKLLLTIRRNGHVYEQTYHLGEPQAPLKQIGDATTTGTEVRFWPSPTIFSDT
LFHYEILAKRLRELSFLNSGVSIRLMDERDGREAHFCYEGGIKAFVEYLNQNKTPIHPKV
FHFTTEQDGIGVEVAMQWNDAYQEGVYCFTNNIPQRDGGTHLVGFRTALTRTLNSYMDKE
DYSKKAKSAASGDDVREGLIAVISVKVPDPKFSSQTKDKLVSSEVKTAVEQAMGEKLADF
LLENPGDAKIVVNKIIDAARAREAARKARELTRRKGALDIAGLPGKLADCQEKDPALSEL
YIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGR
DEYNPDKLRYHNIIIMTDADVDGAHIRTLLLTFFYRQMPEIIERGYVYIAQPPLYKVKKG
KQEQYLKDEDALLQYQTAMALDGATLHVNESAPAIGGEALERLVNQHRAVTHLITRMSRR
APEAVLTQLIYQPELNEALLTSESDLQAWCQSMEAVLNESNHGIQYQMQVRRDEERRLFV
PHAVVRQHGVDREYPISYDFLQSSEYRQLVSLGKEIANLIEEGGYIKRGEKVKPVASFVE
AVEWLMGEGKRGIYIQRYKGLGEMNPDQLWETTMDPEARRMLRVTIDDAVGADQLFSTLM
GDAVEPRRDFIETNALRVANLDV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatacttacgactcctcgaatatcaaggtactgaagggcctggatgcggtc
cgcaagcgcccggggatgtatatcggcgatacagatgatggctcgggcctgcaccacatg
gtgttcgaagtggtcgataactccattgacgaggcgctcgctggctactgctccgatatt
caggtcaagatccactccgatggttccgtctccgtccgtgacaacggccgcggcattcct
gtcgacattcacccggaagagggtcgctccgccgcagaggtcatcatgaccgtgctgcac
gccggcggcaaattcgatgacaactcctacaaggtgtccggcggtctgcacggcgtgggc
gtctccgtggtgaacgcgctctctgacaagctgttgctgaccatccgtcgcaacggtcac
gtctacgagcagacctatcacctgggcgagccacaggccccgctcaagcagatcggcgat
gccaccaccaccgggaccgaagtgcgtttctggccgagcccgaccatcttcagcgacacc
ctgttccactacgagatcctggccaagcgcctgcgcgagctctccttcctcaactccggc
gtctccatccgtctgatggacgagcgtgacggccgcgaggcgcacttctgctacgaaggc
ggcatcaaggcgtttgtcgagtacctgaaccagaacaagaccccgatccacccgaaggtg
ttccacttcaccaccgagcaggacggcatcggcgtcgaagtggcgatgcagtggaacgac
gcctatcaggaaggggtctactgcttcaccaacaacattccccagcgtgatggcggcacc
cacctggtgggcttccgtaccgcgctgacccgtaccctcaactcctacatggacaaagag
gactacagcaagaaggccaagtctgccgccagcggcgacgacgttcgtgaaggtctgatt
gccgttatctccgtcaaggtgccggatcccaagttctcctcccagaccaaggacaagctg
gtctcctccgaagtgaagaccgccgtcgaacaggcgatgggcgagaagctggccgacttc
ctgctggaaaacccgggcgatgccaagatcgtggtcaacaagatcatcgatgcggcccgt
gctcgtgaagcggcccgcaaggcccgcgaactgacccgccgcaagggcgcgctggatatc
gccggtctgcccggcaagctggccgactgtcaggaaaaagacccggcgctctccgaactc
tacatagtggaaggggactctgctggcggttccgccaagcagggtcgcaaccgaaagaac
caggctatcctgccgctcaagggcaagatcctgaacgtggagaaggcccgtttcgacaag
atgatctcctctcaggaggtgggcaccctgatcaccgcactgggctgtggtatcggtcgc
gacgagtacaacccggacaagctgcgctatcacaacatcatcatcatgaccgatgcggac
gtcgatggtgcgcacatccgtaccctgctgctgaccttcttctatcgtcagatgccggaa
atcatcgaacgtggttatgtctacatcgcccagccgccgctctacaaggtgaagaagggc
aagcaggagcagtatctgaaagacgaggatgcgctgctgcaataccagaccgccatggcg
ctagatggtgcaaccctacacgtcaacgagtctgccccggccatcggtggcgaggcactg
gagcgtctggtcaaccagcatcgcgccgtgacccacctcatcacccgcatgtcccgccgt
gcgccggaagccgtgctgacccagctgatctatcagccggaactgaacgaagcactgctg
accagcgagagcgatctgcaggcctggtgccagagcatggaagccgtgctcaacgagagc
aaccacggcatccagtaccagatgcaggtgcgccgcgatgaagagcgccgtctgttcgtg
ccgcacgccgtggtacgtcaacacggtgtcgaccgcgaatacccaatcagctacgacttc
ctgcaatcctccgagtaccgtcagctggtctcgctgggcaaggagattgccaacctgatc
gaggaaggcggttacatcaagcgtggcgagaaggtgaagccggtcgccagcttcgtcgaa
gcggtcgagtggctgatgggcgaaggcaagcgcggcatctacatccagcgctataaaggg
ttgggtgagatgaacccggaccagctgtgggaaaccaccatggatccggaagcccgtcgc
atgctgcgcgtcaccatcgatgatgccgtcggtgccgaccagctattctccaccctgatg
ggtgacgcagtagagccgcgtcgcgacttcatcgagaccaacgccctgcgcgtggccaac
ctcgacgtctaa
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