Arachis hypogaea (peanut): 112741910
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Entry
112741910 CDS
T07294
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112741910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112741910
Enzymes [BR:
ahf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112741910
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112741910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
PTCB-BRCT
RNA_ligase
DNA_ligase_IV
T_Ag_DNA_bind
Motif
Other DBs
NCBI-GeneID:
112741910
NCBI-ProteinID:
XP_072070142
LinkDB
All DBs
Position
14:30365949..30379521
Genome browser
AA seq
1196 aa
AA seq
DB search
MATEQTKFSVMCSLFNWTQRAKSPAKKRAKFRKFLDSFCADRNFFPAIRLVLPNLDRERG
SYGLKESVLAISLIDALGMSRDSEDALRLINWRKGGAKTGANAGNFALVATEVLQRRQGT
ASGGLTIKEVNDLLDQLAASENRAEKTQVLSTFIQKTNAQEMKWIIMIVLKDLKLGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAAEAW
KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYAHAMSEIIQQNILVDRCIL
DGEMLVWDSSLNRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYFGDTSVIHQTLKER
HEILRKVVRPLKGRLEILVPNGGLNSHCSSGEPCWSFIAHNVDEVEKFFKETIENRDEGI
VVKDLGSKWEPSDRSGKWLKLKPEYIQAGADLDVLIIGGYYGSGRRGGEVAQFLVGLAER
PSPNTHPKRFISFCRVGTGLSDDELDALVTKLKPYFRKYEYPKKRPPSFYQVTNHSKERP
DVWVDSPEKSIILSITSDIRTIESEVFAAPYSLRFPRIDRVRYDKAWYECLDVQSFIELV
QSSNGTTQRDTETKQGGKSNRIRSSIRGEKKIMSIVPSHLTQTDVSSIKGDSHIFSNMMF
YFVNVPPSHSLESLHKMIAENGGVFSMNLNNSVTHRVAAESKGFKFEAAKRHGDIIHYSW
ILDCCSQKKLIPLQPKYFLFLSEVTRKKLQEEIDEFSDSYYMYIDLGEFKQLLNTINRSE
DISTIDHYSKKYCPKDEWSVFIGCSIYFHTAIPSVKGEWEVLLQLALRRFKVEVLMGGGR
VTDKLTCATHLVVLSVPGYDAEFDELQRCFTSVDRRFLQSKRLHIIKSHWFEDCLDNNKR
LPEESYSLRPSVIAESTSENGSVMWIHLPLMFDIPAQVLENDTLESHFGGDNVQDQNVPS
EKENRQRSAKAAHEHSLATVSHENVGPRKRGRPAGRGVKNVKMAGNKAQRARPRTVRKRA
KISEYESDKSDSHDNEPEEQENDTGEASFDIYNRHLEPQEVEQQANVQVAETEESSEPNR
AVHDLRNSSESERMYVPEIKMADRTNDQNSELANEIENRADPMLFDKIPGLATAKKVEDT
KHCDLKREASSSSRSSSTILQNLQSLRKKLATRTLPMTCSKIGRLGQRLYHSCICI
NT seq
3590 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagcaaaccaagttcagcgttatgtgcagcctcttcaactggacgcagcgt
gccaagtcgccggccaagaagcgcgcaaagttccgcaagttcctcgactcattctgcgcc
gaccgcaacttcttccctgccattcgcctcgtcctccccaacctcgaccgcgagcgcggc
tcctacggcctcaaggagtcagtcctcgccatttccctcatcgacgccctcggcatgtct
cgcgactccgaagacgcccttcgcctcattaattggcgcaagggcggcgccaagaccggc
gccaatgccggcaatttcgccctcgtcgccaccgaggtactgcagcgcaggcaaggtact
gcttcgggtggattgacgataaaggaggtaaatgacttgcttgatcagttggctgctagt
gaaaacagggccgagaagactcaggttctttctacctttatccaaaagacaaatgcacag
gaaatgaagtggattatcatgatagtcctcaaagatctgaagctaggaattagtgaaaaa
agcatttttcatgaattccatcctgatgctgaagacttatttaatgttacatgcgactta
aaattagtgtgtgaaaaactaagggatcggaatcagcgtcataagcgacaggatattgaa
gttggaaaagctgtgcgtcctcagctagctaagagagttgctaatgcagctgaagcatgg
aagaagcttcatgggaaggaagtggttgtcgagtgcaaatttgatggtgaccgcattcaa
attcacaaaaatggaacagagatacatttcttctcgaggaacttccttgatcattcagaa
tatgcacatgcaatgtcagaaatcatacagcaaaacatcttggtagataggtgcatactt
gatggtgaaatgttggtttgggacagttccttgaatcgttttgctgagtttggctcaaat
caggaaatagccaaggcagcaagggatggacttgacagtgacagacagttatgctatgtt
gcatttgatatcctttattttggagatactagtgtaattcaccaaactttgaaggaacga
catgagattctccgtaaagttgtgaggccattgaaggggcgccttgaaattttagtacct
aatggtggtcttaatagtcattgctcttcaggtgaaccatgttggtcattcattgctcat
aatgtggatgaagttgagaaatttttcaaagaaactatagagaacagagatgagggaata
gttgttaaagacctcggttctaaatgggagcctagtgatcgaagtggaaagtggctaaaa
ttgaagcctgagtacattcaagctggcgctgatctggatgtgcttatcataggaggttat
tatggctctggacgacgtggaggggaggttgctcagttcttggtgggccttgctgagcgt
ccatccccaaatacacatcccaagcggtttatctccttctgtagagttggtactgggctt
tctgatgatgagcttgatgcgttagtaacaaaactaaaaccttacttccgaaagtatgaa
tatccgaagaagaggccgccaagtttctatcaagtaactaatcattcaaaagaaaggcct
gatgtgtgggttgatagccctgagaaatcgattattctgtccataaccagtgatatccga
actatagaatctgaggtatttgctgcaccgtacagcctgaggtttcctcggattgacagg
gtgagatatgacaaagcttggtacgaatgccttgatgtgcaatcattcatagaactagta
cagtccagcaatggtactactcagagggatacagaaaccaagcagggtggcaaatcaaat
cgtataaggtcctccataaggggagaaaagaaaatcatgtccattgttccttctcattta
actcagactgatgtttccagtatcaagggagactctcatatattttcaaatatgatgttt
tacttcgttaatgtgcctccatctcattctcttgagagcttgcacaaaatgattgctgag
aatgggggagttttctcgatgaacttaaataactctgtcactcatcgtgtggcggcagag
agcaaggggtttaaatttgaagctgcaaaacgtcatggtgatatcattcactacagttgg
atattagattgctgctcacaaaagaagcttatccccttacagccaaagtacttcctcttc
ctatctgaagtaacaaggaagaagttacaagaagaaattgacgagttctctgactcttac
tacatgtatattgatcttggagagttcaaacagctcttaaacactattaataggtcagaa
gatatcagtactattgatcattacagcaaaaaatactgcccaaaggatgagtggtctgtc
tttattggatgctccatatatttccacactgcaataccatcagtgaaaggggaatgggaa
gttctattgcaacttgctttgagaagattcaaggttgaagttctcatgggcggtggtaga
gttactgataaacttacttgtgcaacccatttagttgtcttgtcagttccaggatatgat
gccgaatttgatgagctacagagatgttttacttcagtggataggaggtttctccagagc
aagaggttgcatataataaaatcccattggtttgaagattgtctggacaataacaaaaga
ttaccagaagaaagttacagcttgaggccctctgtaatagcagagtcaacatctgaaaat
gggtcagttatgtggatccatttgcctttaatgtttgatatacctgcacaagtgcttgaa
aatgacaccttagagtctcactttggtggagacaatgtacaagaccagaatgtaccctct
gaaaaggaaaatagacagagaagtgcaaaagctgctcatgaacacagtttggccacggtg
tcccatgagaatgttggcccaaggaagagaggaagacctgcagggagaggtgttaaaaat
gttaagatggctggcaacaaagcccaaagagcacggccacgcactgtgagaaagcgtgcg
aaaataagcgaatatgaatcagacaaaagtgattctcatgacaatgaaccagaagagcag
gagaatgacaccggagaagcaagttttgatatttacaatagacatttggaacctcaggag
gtcgagcaacaggccaatgtccaagttgccgaaacagaagaaagttctgaaccaaacagg
gcagtgcatgatttgaggaatagtagtgagagtgaaagaatgtatgttccagaaataaaa
atggcagataggaccaatgaccaaaacagtgaattggctaatgagattgaaaatcgggct
gatcccatgttatttgacaagattcccggccttgctaccgccaagaaagttgaggacact
aagcattgtgatctaaagagagaggccagcagcagcagcagaagcagtagcaccatactg
cagaacctacaatcactaagaaagaagttagctacaaggacgttgccaatgacctgctca
aagattggtagactagggcagcgcctctatcattcgtgtatatgtatata
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integrated database retrieval system
