Arachis hypogaea (peanut): 112766987
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Entry
112766987 CDS
T07294
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112766987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112766987
Spliceosome [BR:
ahf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112766987
Complex C
U4/U6.U5 tri-SnRNP related factors
112766987
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
112766987
NCBI-ProteinID:
XP_025668658
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Position
Arahy.17:complement(17676046..17681780)
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AA seq
452 aa
AA seq
DB search
MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKILWSWYEPYVK
DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVTTNLEKLKLPTTHSG
STGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTAPAPHERNGSDDI
RRSRSQSREYSDRDRDRDRDRDRDRSRSRDRDRDRERDRDRERERDRDRERDRDRYRDRD
RSRDLDRERDRERYRDRDRDYERDRHRRDRDRERDRERSYDYDRRSRYPEREGSRDYDNG
SRRHRSRSRSRSRSRSRSRSQSLQAGTARFDSRSSPQRDGGKKASASSNLAKLKDMYGDL
GDNKGDANVERIPRRDNGGEEVIRLGGSNWRY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacttgtggcaagcccattgattccttgctggagaaggtgctttgcatg
aacattctgtcatctgattacttcaaggagctatatcggttaaagacataccatgaagtt
attgatgagatttacaaccaagttgatcacgtagagccatggatgacaggaaattgtcgt
ggcccttcaactgctttttgccttctatacaagttcttcaccatgaagctgactgtcaaa
caaatgcacgggctactaaaacacccggattcaccttacattagagcgattggatttctg
tatctgagatatgtcgctgatccgaaaattctgtggagctggtatgagccttatgttaaa
gatgatgaggaattttctcctggatccaatggtcgaatgactaccatgggtgtatatgtt
cgtgatctgcttcttggacagtattactttgacaccctctttccacgcatccctgttcct
gtactgcggcaggtaacgactaatcttgaaaagttgaagctacctaccacacattctggt
tcaacaggtgaaactacccgtcatggttctgatgatactgcccgtcgaccaccctctgta
aaagcagccctgtcagtgtcttttgggcagcgcgcaccacatcgtgcctccacaagggat
tcttcacctatccgccgtacagcacctgcccctcatgaaagaaatggcagtgatgacata
agaagatctcgcagccagagtcgtgaatattctgaccgggaccgggaccgggaccgggac
cgggaccgggaccggtcgaggtccagggacagggatcgagaccgagaaagggacagggat
cgagaacgtgaaagggacagggatcgggagcgcgatagggacagatatcgtgaccgagat
aggagcagggacttggatcgagagcgggatcgggaaagataccgggatcgggatagagat
tatgagagggacagacacaggagggacagggatcgggaaagagatagagagcgaagttat
gattacgataggaggtctcggtatcccgagagggaaggcagtcgggattatgacaatggc
agtaggcgtcatcgtagtaggagcaggagccgaagtagaagtaggagcaggagtagaagt
cagagcttgcaagctggcactgcacggttcgactcacggtctagtccacagagagatgga
ggcaagaaggcctctgcatccagtaatctagctaaacttaaagatatgtatggcgactta
ggcgataataaaggagatgccaacgtggaacgtatccctagaagggataatggaggtgaa
gaggttattcgacttggtggttctaattggaggtattga
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