Arachis hypogaea (peanut): 112769204
Help
Entry
112769204 CDS
T07294
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
KO
K12600
superkiller protein 3
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112769204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112769204
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
112769204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_11
TPR_8
TPR_14
TPR_19
TPR_17
TPR_12
ARM_TT21_C
TPR_CcmH_CycH
TPR_9
TPR_7
BTAD
TPR_15
TPR_10
Motif
Other DBs
NCBI-GeneID:
112769204
NCBI-ProteinID:
XP_025669446
LinkDB
All DBs
Position
18:complement(10226434..10235249)
Genome browser
AA seq
1183 aa
AA seq
DB search
MESQTHNEEQGVEHLFRRLQDFPDDASLHFDIGLFLWEKGGEANGSAEKAAEHFIESAKL
NPKNGEPFKYLGHYYGRISIDTQRALKCYQRAVALNPDDSDSGEALCNLLYQGGKDSLEA
AVCREASEKSPRAFWAFRRLGFLQVHQKKWSEAVQNLQHAIRGYPTCAELWEALGLAYQR
LGRYTAAIKSYGRAIELDDKMVFALVESGNISLTLGSFRKGVEQFRQALEISSHCVPAQY
GLALGLLCLAKDCMNLGAFKWGVSLLEEASEVARASAYSVRNVSCIWKLYADVQLAYARC
YPWIEEVQELEANKEAFSASIISWRRTCLSAARLARFSYQRALHLCPWQANIYADIAVTS
DLITSLDKDYERDLDACRQLPEKMCVGALLLEGDNYEFWVTLGCLSDQNALNQHALIRGL
QLNVSLAVAWGYLGKLYSKMSKKKLARQMFDRARSIDPSLALPWASMSADCCVRESAPDE
AFESCSQAVQMMPLAEFQIGLTKLAMLSGHLSSTQVFGAIQQAVQRSPHYPESHNLHGLV
CESRKDYRSAAISYRIALHAISIASLDNQNSQIKDVSINLARSLCKAGNAVDAIQECENL
RKEGMLDFEVFQVYAISLWQLGKNDLALSIVRSLAANVSSMEKTAMEISVSFIFRLLYYI
SGLDAVITNIMKMPKELIQSSKVNFVMSAIDALDGHNRLGFLVSSNLYFLKDHDEIDRVH
FLIALGKLVKNGHDGFLAVQSGIAYLRRILHMFPNCSLIRNLVGYLSLSGKESNSCHLAT
RCCKLDHLDLSDKEGLKSASDIHGAAVVACYANGNSNPKSTFQTCTNQYSRGPATIRYLQ
RYFHQKPWNHDARYLLILTYFQRAREERFPHQLCVILNRLICVALSNEFCGKKEMCYEYR
QFQLLLCASEISLQCGNHITSISHAQKASVLMLPDNYLFFAHLLLCRVYAIKGDLLNCKK
EYMRCLELRTDCHIGWMSLKLMECHYQLQIDSNLIDSNFEECLKKGANSWNMWIAVYNLV
RGLISFHQKDLVSAEELMREACSMAGFESCLFLCHGAICMELARQCGGSMLLSWAVDSLN
RFHELLPISLPLASLLVAQAEGSLGAKDKWDRSIRLEWYSWPSVMRPAELYFQMHLVVRQ
LKDGPNVTGRLESSHSAWRWVIRAIHMNPSCMRYWKVLQKLME
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcaaacacataatgaggaacaaggtgtagaacatctcttcagacgcttgcag
gatttcccagatgatgcgtcgctgcattttgatattggcttattcttatgggaaaaagga
ggagaagcgaatggatccgcagaaaaagcggctgaacatttcattgaatcagccaaattg
aaccccaagaatggagaacctttcaaatatcttggtcattattatggccgcatttccatt
gatactcagagagcccttaagtgttatcagcgagctgttgctctcaatcctgatgattct
gattctggggaagctctttgcaatttactataccaaggaggaaaggatagtttggaggca
gcagtatgtcgtgaagcttctgaaaagtcaccaagggccttttgggcattccgtagattg
ggtttcctgcaggttcatcagaagaaatggtctgaagctgttcagaatcttcaacatgcc
atacgaggctatcctacatgtgctgaactgtgggaagctttgggccttgcttatcagcga
ctgggcaggtatactgcagccataaagtcttatggccgtgccatcgagttggatgataag
atggtctttgctttggttgaaagcggaaatatctcattgacacttggttcatttaggaag
ggagttgaacaatttcgacaagctttggagatttcatcacattgtgtgcctgcacaatat
gggcttgctttggggctgctttgtttagcaaaagattgcatgaacctgggagcatttaag
tggggggtttctttattagaggaagcatctgaggttgcaagagcaagtgcttattctgtt
aggaatgtctcatgtatttggaaactatatgctgacgttcagcttgcatatgcaagatgt
tatccttggattgaggaggtccaagaattggaagctaataaggaagctttcagtgcttcc
atcatttcttggaggagaacctgtctttcggcggcaagacttgctaggttttcgtatcaa
cgagccttgcacttgtgtccatggcaagcaaacatttatgcagatattgctgtaacttca
gatcttattacctcattggacaaggattatgaacgagacttagatgcatgtaggcagctg
ccagagaaaatgtgtgtgggagctttgctgcttgaaggtgacaattatgagttttgggtg
acattgggatgtttgtctgatcaaaatgcactaaatcaacatgctctaatcagaggattg
cagttgaatgtatctctagctgttgcttggggatatcttgggaagctttatagtaaaatg
agcaaaaagaaattggcacggcaaatgtttgatcgtgctagaagtattgatcctagcctt
gctttgccatgggcaagcatgtcagctgattgttgtgtgagggagtctgctcccgatgag
gcgtttgagagctgttcccaagcagtgcagatgatgcctttagctgaattccaaattggg
ctcactaagcttgctatgctgagtggccatctttcatctacacaggtttttggagctatt
cagcaagctgtgcagcgatctcctcactatcccgaatcacataatttacatggtctggtc
tgcgagtctcgaaaagattacagatctgctgctatttcttacaggatagccctccatgcc
attagcattgcctcgttagataatcaaaactcacagataaaagatgtatcaattaatttg
gcgagatcactttgtaaggctgggaatgctgttgatgctatacaggaatgtgaaaatttg
aggaaagaaggaatgcttgacttcgaagtttttcaagtatatgcaatctcgttgtggcaa
cttggtaaaaatgatttagcactctcaatagtcagaagtcttgcagcaaatgtttcttct
atggaaaagacagccatggaaatctccgttagtttcatctttagattattatactacatc
agtggactagatgcagtcataaccaacattatgaaaatgccaaaggagcttattcaaagt
tcaaaagttaattttgttatgtctgctatcgatgctcttgatggacacaatcgtcttgga
tttcttgtctcaagtaacctatattttctcaaagatcatgatgaaattgacagggtgcac
tttttaatagcacttggtaaactggtgaaaaatgggcatgatggcttccttgcagttcag
agtggaattgcctacctcagaaggattctgcacatgttccctaactgtagtttgataagg
aaccttgttggctatctctcactatctggtaaagagtcgaacagttgccatctggctaca
aggtgttgtaaactggaccatcttgacctttctgataaagaaggtttaaaatcagcttct
gatattcatggtgctgcagtagttgcctgctatgccaatgggaacagcaacccaaagtct
acttttcaaacttgtacaaatcagtattctagaggtcctgcaacaatccgatacctgcag
agatactttcatcagaaaccatggaatcatgatgctcggtacttgcttattcttacctat
ttccagagggcacgtgaagagagatttcctcatcagctgtgtgttattctaaatcgtcta
atatgtgttgctctttcaaatgaattttgtggaaagaaagaaatgtgctatgaatataga
caatttcaacttctactttgtgcttctgagatcagtttacaatgcgggaatcacatcacc
tctatatcccatgcccaaaaggcctctgtactcatgcttcctgataattatttgttcttt
gcccacctactattgtgccgtgtatatgccataaaaggtgatcttttgaattgtaagaaa
gagtatatgcgatgcttggagttgaggacagattgccatattggttggatgtctctcaaa
cttatggaatgccattatcaattgcaaattgattcaaatctcattgattcgaactttgaa
gaatgccttaaaaagggtgcaaattcatggaatatgtggatagctgtgtataacctggtg
aggggtttgatttcctttcatcagaaggatttagtctcagccgaagagctcatgcgagag
gcttgttcaatggcaggttttgaaagctgcctttttctatgtcatggtgctatctgcatg
gagcttgccaggcagtgtggcggttcgatgctcctatcatgggctgttgatagtcttaac
agatttcatgagcttttgccaatctctttgcctcttgcctccttattggttgctcaagca
gaaggaagcctcggtgcaaaagacaaatgggacagaagcattcgccttgaatggtattcc
tggccatcagtaatgaggcctgcagagctctactttcaaatgcatttggttgtaaggcag
ttaaaagatggacccaacgtcacaggtagattagagtcctctcatagtgcttggagatgg
gtaattcgggcaattcacatgaacccttcttgcatgagatattggaaggtcttacagaag
cttatggagtag
DBGET
integrated database retrieval system
