Actinoalloteichus hoggarensis: AHOG_02780
Help
Entry
AHOG_02780 CDS
T04975
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ahg
Actinoalloteichus hoggarensis
Pathway
ahg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AHOG_02780 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahg03021
]
AHOG_02780 (rpoB)
03400 DNA repair and recombination proteins [BR:
ahg03400
]
AHOG_02780 (rpoB)
Enzymes [BR:
ahg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AHOG_02780 (rpoB)
Transcription machinery [BR:
ahg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AHOG_02780 (rpoB)
DNA repair and recombination proteins [BR:
ahg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AHOG_02780 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ASO18216
UniProt:
A0A221VXE5
LinkDB
All DBs
Position
605394..608888
Genome browser
AA seq
1164 aa
AA seq
DB search
MAVSRATQATAATNSMSGIPGAPKRVSFAKIREPLGVPDLLDLQVQSFEWLTGAESWFQR
RIDAGEDLPVGGLEEVLNEISPIEDFSGSMSLSFSSPRFDEVKASVEECKDKDMTYAAPL
FVTAEFTNNTTGEIKSQTVFMGDFPMMTNKGTFIINGTERVVVSQLVRSPGVYFDHAVDK
TTDKDVYNVKIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTAERIRERFG
FSETLIATLDKDHTAGQDEALLDIYRKLRPGEPPTRESAQTLLENLFFKDKRYDLAKVGR
YKLNKKLGINEPVQAGTLIEEDIVTTIEYLVRLHAGDDKMTVGQGEDAVEVPVESDDIDH
FGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFG
TSQLSQFMDQTNPLAGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLSSYGRVNPFGFIETPYRKVVEGRVTDQVDFLTADEEDRFVKAQANTPIADDG
TFLEDRVLVRRKGGELDYIPPSDVDYMDVSPRQMVSVATAMIPFVEHDDANRALMGANMQ
RQSVPLLRSESPLVGTGMELRAAVDAGDVLVVDKAGVVEEVCADFITVMADDGTRQTYRL
HKFRRSNQGTCTNQKPIVSEGERVEIGQVIADGPCTDEGEMALGKNLLVAIMPWEGHNYE
DAIILSQRLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEDVLADLDERGIIRI
GAEVRPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGQNGKVIGIRV
FSRDDDDELPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPAEDMPFLPDGTP
VDIILNTHGVPRRMNIGQVLETHLGWIAKQGWDVEGQPDWAARLPEDLYSAEPGTNTATP
VFDGAREEEITGLLGSTLPNRDGERMVKADGKAQLFDGRSGEPYPYPVAVGYMYILKLLH
LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDD
VVGRVKVYEAVVKGENIPDPGIPESFKVLLKELQALCLNVEVLSTDGAAIEMRDTEDEDL
ERAAANLGINLSRNESPSVDDVVN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgcgcgacccaggccactgctgcgaccaactccatgtcggggatccct
ggggcacccaagcgggtctcgttcgcgaagatccgtgagccgctcggggtgcccgatctg
ttggaccttcaggtccagtcctttgaatggctcaccggggccgaatcctggttccagcgc
cgcatcgacgcgggcgaggacctcccggtcggtgggctcgaagaggtcttgaacgagatc
tccccgatcgaggacttctccggctcgatgtccctctccttctccagcccgcgcttcgac
gaggtcaaggcctccgtcgaggagtgcaaggacaaggacatgacctacgcggctccgttg
ttcgtcaccgcggaattcaccaacaacaccaccggcgagatcaagagccagacggtgttc
atgggtgatttcccgatgatgacgaacaagggcacgttcatcatcaacggcaccgagcga
gtcgtcgtctcccagttggtccgctcgccaggcgtctatttcgatcacgccgtcgacaag
acgacggataaggacgtctacaacgtaaagatcattcccagccgtggagcctggctggag
ttcgatgtcgacaagcgcgacacggtcggcgttcggatcgaccgcaagcgcaggcagccc
gtcaccgtcctgctgaaggccctcggctggaccgcggagcggatccgcgagcgcttcggc
ttcagcgagacgctgatcgccacgctcgacaaggaccacaccgccgggcaggacgaggcg
ctgctcgacatctaccgcaagctgcgtcctggcgagcctccgaccagggagagcgcgcag
accctgctggagaacctcttcttcaaggacaagcgctacgacctcgccaaggtcggccga
tacaagctgaacaagaagctcggcatcaacgagcccgtccaggcgggcacgttgatcgaa
gaggacatcgtcacgacgatcgagtacctggtccgcctgcacgcgggcgacgacaagatg
accgtcggtcagggcgaggacgccgtcgaggtgcccgtcgagagcgacgacatcgaccac
ttcggcaaccgcaggcttcggacggtcggcgagctgatccagaaccagatccgagtcggc
ctgtctcggatggagcgggtcgtccgcgagcggatgaccacgcaggacgtcgaggccatc
acgccccagaccctgatcaacatccggcccgtcgtggccgcgatcaaggagttcttcggc
acctcgcagctctcccagttcatggaccagaccaacccgctcgcgggtctgacccacaag
cgtcgtctctcggcgctcgggccgggcggtctgtcccgggagcgtgcgggcatggaggtg
cgtgacgtccacccgtcgcactacggccgcatgtgcccgatcgagacgccggaaggcccg
aacatcggtctgatcggttcgctgtcgtcctacggccgggtgaaccccttcggcttcatc
gagacgccgtatcggaaggtcgtcgagggtcgggtcaccgaccaggtcgacttcctgacg
gccgacgaggaggaccgcttcgtcaaggcgcaggcgaacacgccgatcgccgacgacggc
accttcctggaggaccgagtcctggtccggcggaagggcggcgagctggactacatcccg
ccgtcggacgtcgactacatggacgtctcgccccggcagatggtctccgtcgccacggcg
atgatccccttcgtcgagcacgacgacgccaaccgtgccctgatgggcgccaacatgcag
cggcagtcggtgccgctgctgcgcagcgagtcgccgctggtcggcacgggcatggagctg
cgggccgccgtcgacgccggtgacgtgctggtggtcgacaaggcgggcgtcgtcgaagag
gtgtgcgccgacttcatcaccgtcatggccgacgacgggacgcggcagacctaccggctg
cacaagttccgccgttcgaaccaggggacgtgcaccaaccagaagccgatcgtctccgag
ggcgagcgcgtcgagatcggccaggtcatcgccgacgggccgtgcaccgacgagggcgag
atggccctgggcaagaacctgctcgtggcgatcatgccgtgggaggggcacaactacgag
gacgcgatcatcctgtcgcagcgtctcgtgcaggacgacgtgctgacctcgatccacatc
gaggagcacgagatcgacgctcgggacacgaagctgggtgccgaggagatcacgcgggac
atcccgaacgtctccgaggacgtgctggccgacctcgacgagcgcggcatcatccgcatc
ggcgccgaggtccggcccggcgacatcctggtcggcaaggtcacgccgaagggcgagacc
gagctgactccggaggagcggctgctgcgggcgatcttcggcgagaaggcccgcgaggtg
cgggacacctcgctgaaggtgccgcacggccagaacgggaaggtcatcggcatccgggtg
ttcagccgggatgacgacgacgagctgccccccggcgtgaacgagctggtccgcgtgtac
gtggcgcagaagcggaagatccaggacggcgacaagctggccggtcggcacggcaacaag
ggcgtcatcggcaagatcctgcctgccgaggacatgcccttcctgcccgacggcacgccg
gtcgacatcatcctgaacacccacggtgtgccgcgacggatgaacatcggccaggtcctg
gagacacacctcggctggatcgcgaagcagggctgggacgtcgagggtcagcccgactgg
gccgcccgccttcctgaggacctgtactcggcggagcctggtacgaacaccgccaccccg
gtgttcgacggtgccagggaagaggagatcaccggactgctcggctcgacgctgcccaac
cgggacggcgagcggatggtcaaggccgacggcaaggctcagctgttcgacggacgcagt
ggcgagccgtacccctacccggtcgcggtcggctacatgtacatcctgaagctgctgcac
ctggtggacgacaagatccacgctcggtccaccggcccgtactcgatgatcacccagcag
ccgctcggtggtaaggcgcagttcggcggtcagcggttcggcgagatggagtgctgggcc
atgcaggcctacggcgccgcctacacgctccaggagctgctcacgatcaagtcggacgac
gtggtcggccgggtcaaggtctacgaggctgtggtgaagggggagaacatccccgatccc
ggcatcccggagtccttcaaggtgctgctcaaggagctgcaggcgttgtgcttgaacgtc
gaggtgctctccaccgacggcgccgcgatcgagatgcgcgacaccgaggacgaggacctg
gagcgggccgccgcgaacctgggcatcaacctctcgcgcaatgagtcgccgtctgtcgac
gatgtcgtgaactga
DBGET
integrated database retrieval system
