Actinoalloteichus hymeniacidonis: TL08_04085
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Entry
TL08_04085 CDS
T04472
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm00040
Pentose and glucuronate interconversions
ahm01100
Metabolic pathways
ahm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TL08_04085
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TL08_04085
Enzymes [BR:
ahm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TL08_04085
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pel9A-like_beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AOS61647
UniProt:
A0AAC9HLP2
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Position
838189..840885
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AA seq
898 aa
AA seq
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MRRPLAARLGAVLATSALAVAGLVISTTGAVAAPATATGFASQNGGTTGGAGGETVRATT
GTQIHEALCSRADSSTPIIIEVEGTVNHGNTSKVSGDSCDTDDDRIELKNISNITIVGVG
SGALFDQLGIHIRDSSNIILQNLTVRNVKKSGSPTSNGGDAIGMESNVRNVWADHLTLEA
SGGEDEGYDGLFDMKNNTQYVTLSYSILRNSERGGLIGSSESDRSNGYVTFHHNVYQNLN
SRTPLLRGGIAHAFNNHYEGLVESGINSRAGARAKVENNHFQDSKDVLGTFYTDERGTWE
VAGNIYDNVTWSEEDDENYPAGPNPESTTSVSIPYDYRLDDAECVAGIVAETAGANKGLL
VSDGQCSSQPPDPTDPPDPDPTDPPDPDPTDPPSGANLSLGAGADGSSKASGTSYGNVVD
GNLNTYWSPNGSTGRISVKWNSPTTVSTVNIREAAGAEGNIRNWEVVNHDTGAVLVSGSG
AGVTTFAATSLRKISIHITGSNGTPRVAEIETFAAGTTPPDDDDDDDDDDGGGDQPPPTG
EALYAAPDGSDNAAGTESDPTTLTSAIDRVAPGETIYLRGGTYNESETVHIEPGNDGTSS
SRTELFAYPGETPVINFSAQSEDSSNRGLAIGADWWHIQGIIVERAGDNGILLGGNNNII
ERVVTRFNRDTGLQLSRYAAGAPASEWPSNNLILSSESHDNADSDGEDADGFAPKLTVGP
GNVFRNCVAHNNIDDGWDLYTKGDTGPIGEVTIEDSLSYENGTLSDGTENSSGDRNGFKL
GGEDISVDHTVVRTIAFDNGKHGFTYNRNHGSMTIENNLSIGSEERNYNFDGGDSDFRNN
TSCNSGSNDRIIGNDAGGNQWWSGSNGSRCSQYSGNLDWSFASDGSLEVTLGGTPVNL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaccattagccgcgcggctcggtgccgtgctggcgacctcggcattggccgtt
gcaggactggtgatctccactaccggcgccgtggcagcccccgccaccgcgaccggcttc
gccagtcagaacggcgggacgaccggcggtgcgggcggagagacggtccgggccaccacc
ggcacccagatccacgaggccctgtgctcgcgggccgacagcagcaccccgatcatcatc
gaggtcgagggcactgtgaaccacggcaacaccagcaaggtgtccggcgacagctgcgac
accgacgacgaccggatcgaactcaagaacatcagcaacatcacgatcgtcggggtcggc
agcggcgccctgttcgaccagctgggcatccacatccgcgattccagcaacatcatcctg
cagaacctgaccgtccggaacgtcaagaagtcgggctcaccgacgtccaacggtggcgac
gccatcggcatggagagcaacgtccgcaacgtctgggccgaccacctcacgctggaggcc
tcgggcggcgaggacgagggctacgacggcctgttcgacatgaagaacaacacgcagtac
gtgacgctgtcctacagcatcctgcgcaactccgagcgtggcggcctcatcggatcgagt
gagagcgaccggtcgaacggctacgtcaccttccaccacaacgtgtatcagaacctcaat
tcccggacgcccctgctgcgcggcggcatcgcccatgcgttcaacaaccactacgagggc
ctcgtcgaatcggggatcaactcgcgggcgggcgcgcgggccaaggtggagaacaaccac
ttccaggactccaaggacgtcctgggcaccttctacaccgacgagcgcggtacgtgggag
gtcgcgggcaacatctacgacaacgtgacctggtccgaggaggacgacgagaactatccc
gcgggccccaacccggagtccaccacctccgtcagcatcccctacgactaccgcctcgac
gacgccgaatgcgtggcgggcatcgtggcggagacggcgggcgccaacaagggactgctg
gtgtcggacggccagtgctcgtcgcagccgccggatccgaccgatcccccggatcccgac
ccgaccgacccgccggacccggacccgaccgatccgccgagcggagccaacctcagcctc
ggagcgggcgccgacggctccagcaaggcatccgggaccagctacggcaacgtcgtcgac
ggcaacctgaacacctactggtcgcccaacggctcgaccggtcgcatctcggtcaagtgg
aactcgcccaccacggtgtccacggtcaacatccgcgaggcggccggagccgagggcaac
atccgcaactgggaggtcgtcaaccacgacaccggcgccgtcctggtctccggcagtggg
gcgggagtcaccaccttcgccgcgacctcgctgcgcaagatctccattcacatcaccggc
tcgaacggcaccccacgggtcgccgagatcgagaccttcgccgcaggtaccacgccgccc
gacgacgatgacgacgacgatgacgatgacggcgggggcgaccagccgccgccgaccggc
gaggcactgtacgcggcgccggacggcagcgataacgccgcaggcaccgagtccgacccg
acgacgctcacctcggcgatcgatcgcgtcgcccccggcgagaccatctacctgcgcggc
ggcacctacaacgagtcggagaccgtccacatcgagcccggcaacgacggcacctcgagc
agccgtaccgagctcttcgcctaccccggcgagaccccggtcatcaacttctcggcgcag
agcgaggactcgtccaaccgtgggctggccatcggcgccgactggtggcatatccagggc
atcatcgtcgaacgcgcaggcgacaacggaatcctgctcggcgggaacaacaacatcatc
gagcgcgtggtgacgcggttcaaccgggacaccgggctgcaactgtcgcgctatgccgca
ggggcgcccgcctcggagtggccctcgaacaacctcatcctcagctcggagtcgcacgac
aacgccgactccgacggtgaggacgccgacggattcgccccgaagctcaccgtcggcccc
ggcaacgtcttccgcaactgcgtggcccacaacaatatcgacgacggctgggatctgtac
accaagggcgacaccggcccgatcggcgaggtcaccatcgaggactcgctgtcgtatgag
aacggcacgctctcggacggcaccgagaactccagcggcgaccgcaacggtttcaagctc
ggcggcgaggacatctcggtcgaccacaccgtggtgcggaccatcgccttcgacaacggc
aagcacgggttcacctacaaccggaaccacggctcgatgacgatcgagaacaacctgagc
atcggcagcgaggaacgcaactacaacttcgacggcggtgactccgacttccggaacaac
acctcctgcaacagcgggtccaacgaccggatcatcggcaacgatgctggtggaaaccag
tggtggtccggttccaacggatcccggtgctcgcagtactccggcaacctggactggagc
ttcgcctccgacggctccctggaggtgaccctcggcggcactccggtgaatctctga
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