Actinoalloteichus hymeniacidonis: TL08_17835
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Entry
TL08_17835 CDS
T04472
Name
(GenBank) RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ahm
Actinoalloteichus hymeniacidonis
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahm03021
]
TL08_17835
Transcription machinery [BR:
ahm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TL08_17835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_24
MarR
MarR_2
DUF3562
HTH_31
Sigma70_ECF
HTH_26
HTH_IclR
HTH_Tnp_4
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
AOS64367
LinkDB
All DBs
Position
4229860..4230663
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AA seq
267 aa
AA seq
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MRPEQARPGDGERDARGHEDVRYAHLAPLFAQLAELDPDGDEHTRLRERLVTEHLPLARH
VARRFANRGESQEDLVQVATMGLIKAVDRFDHQRGVDFLSYAVPTVMGEVRRHFRDTGWT
VRVPRRLQELHLALNSASGTLSQTLGRAPTPGELSEQLEIPVEEVYEGLAAGHAYRSSSL
DEMLVDDESMALGDTLGQEEPELENVENREMLQPLLAALPARDRTVLLLRFFANMTQTQI
AERVGISQMHVSRLLARTLRRLRDEAR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcccggagcaggcccggcctggcgacggagagcgagatgcacgcggacacgaggat
gtccgctatgcgcatctcgccccgttgttcgcccagctcgccgagctggaccccgacggt
gacgagcacacccgactgcgggaacggctggtcaccgagcaccttccgctggccaggcac
gttgcccgccgtttcgccaaccggggtgaatcccaggaagacctggttcaggtcgccacg
atggggctgatcaaggcggtggaccgcttcgaccaccaacgcggggtcgatttcctgtcc
tacgcggtgccgaccgtgatgggcgaggtgcggcgtcatttccgcgacaccggatggacg
gttcgggtcccgcgcaggctccaggaactacacctggccctcaattcggccagcgggacg
ctgtcgcagaccctcggccgggcaccgacgcccggagagctctccgagcagttggagatc
cccgtcgaggaggtctacgagggtctcgccgccggacacgcctaccgcagcagttcactc
gacgagatgctcgtcgatgacgagagcatggcgctcggtgacacgctcggccaggaggaa
cccgagctggagaacgtggagaaccgcgagatgctgcagccgctactcgccgcactgccc
gcgcgggatcgcaccgtactgctgttgaggttcttcgcgaacatgacccagacccagatc
gccgagcgggtggggatctcgcagatgcatgtatcccggctgttggctcgcacgctgcgc
cggttgcgcgacgaggcacgctga
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