Azospirillum humicireducens: A6A40_14585
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Entry
A6A40_14585 CDS
T04409
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ahu
Azospirillum humicireducens
Pathway
ahu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6A40_14585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahu03400
]
A6A40_14585
Enzymes [BR:
ahu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A6A40_14585
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A6A40_14585
DNA repair and recombination proteins [BR:
ahu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A6A40_14585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
AstE_AspA
Motif
Other DBs
NCBI-ProteinID:
ANC92991
UniProt:
A0A161IQJ8
LinkDB
All DBs
Position
3179158..3180000
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVETVCRGLAPHLEGRRLVRVEQRRPNLRTPFPPRFCERLTGRRVESVRRRAKYI
LMHLDDGGVLIAHLGMSGRMIIAPERPASFDKHDHVVFETDMGTVVTFNDARRFGLMDLT
VADALGDHPMLRNLGPEPLGNEFSGPELARRLAGKITPIKAALLDQSIVAGLGNIYVSEA
LYQSGILPTRSSASLSAEEVDRLAAAVREVLERAIAAGGSSLRDYRQASGELGYFQHQFA
VYDREGEGCPDCDCDRARTGGVQRIVQSGRSTFFCAARQR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaagtcgagacggtgtgccggggcctcgccccgcatctcgaaggc
cggcggctggtccgtgtggagcagcggcggcccaacctgcgcaccccctttccgccgcgc
ttctgcgaacggctgaccggccggcgcgtcgagtcggtgcggcggcgggccaaatacatc
ctgatgcatctggacgacggcggtgtcctgatcgcgcatctcggcatgtccggccgcatg
atcatcgcgccggaacgccccgcttccttcgacaagcacgaccatgtggtgttcgaaacc
gacatgggcacagtcgtcaccttcaacgacgcccgccgcttcggcctgatggacctgacg
gtggccgacgcgctgggcgaccacccgatgctgcgcaacctgggaccggagccgctcggc
aacgaattctccggacccgagcttgcccgtcggctggcaggcaagatcacgccgatcaag
gccgcgctgctcgaccagagcatcgtcgccggcctcggcaacatctatgtgtcggaagcg
ctgtaccagtccggcatcctgcctacacgcagttcggccagcctgtccgccgaggaggtc
gaccgcctcgccgccgcggtgcgcgaggtgctggagcgcgccatcgccgccggcggttcc
tccttgcgcgactaccggcaggcgtcgggcgagctcggctatttccagcaccagttcgcc
gtctacgaccgcgagggggagggctgccccgattgcgattgcgaccgcgcccggacgggg
ggcgttcagcggattgtacagtccggccgctcgactttcttttgtgcggcgcgccaacgg
tga
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