Arcanobacterium hippocoleae: RQN30_01745
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Entry
RQN30_01745 CDS
T10229
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ahx Arcanobacterium hippocoleae
Pathway
ahx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RQN30_01745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahx03019
]
RQN30_01745
03009 Ribosome biogenesis [BR:
ahx03009
]
RQN30_01745
Enzymes [BR:
ahx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RQN30_01745
Messenger RNA biogenesis [BR:
ahx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RQN30_01745
Ribosome biogenesis [BR:
ahx03009
]
Prokaryotic type
rRNA processing factors
RQN30_01745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
XCB30191
LinkDB
All DBs
Position
complement(342191..344632)
Genome browser
AA seq
813 aa
AA seq
DB search
MAPMTALLFQAPDVTRAVRARLAAHKEAKQSQAPEDSVPEEANDVLNQQETADLPKKSRR
GSRGGKRQDAQDLTKQNQEANQDEQKDEHQQGAGKEELNTENVSSEHGAKRTRKRLHSNV
NSEDSANDSGNQNSAQTQEESGTTVRRRRRRSDSSAADEVSAPKGSTRLEAKRQRRKEGR
EAGRRRHSITESEFLARREAVNRQMLVREHDGLNQIAVIEDSVLVEHYVARHTQTSMVGN
VYLGRVQNVLPSMEAAFVDIGKGRNAVLYSGEVNWEAAGLEGKPRKIEDALKSGDTVLVQ
VTKDPIGHKGARLTGQITLAGRHLVLVPNGTMMGISRKLPETERSRLKKILKQVVPSEHG
VIVRTAAEGATEEQIKGDVKRLIKSWKDIDAKSKSSKNAPSLLKGEPELAVRVVRDVFNE
DFNSLQVQGENAWNTIWEYVHELSPELEERVTKWEDNRDIFIQYRVDEQLQKAFDRKVFL
PSGGSLVIDRTEAMTVIDVNTGKFTGATGGTLEETVTKNNLEAAEEIVRQLRLRDIGGIV
VIDFIDMVLEANRDLVLRRLIECLGRDRTRHQVAEVTSLGLVQMTRKRVGQGLVEAFSTT
CEACEGRGYISHDHPVEKDEIFDESDSKQLPKRRNENLHPQTFDSEAEEKHAEVKAALAN
IAAAAAHKHEETHGVNHGAGADETENFRKAAKQNSGAGTDDAAKRPKRQKKRSRKSVHSD
SDDANSLLTRQMNSDSGESAEKAVSSAADSADSRVLEAASQTAFTVPEQRESGDQDPESV
PKRRRVSSTGTITPASSSAFTIMSFPLSGKSDE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgatgacggcactgcttttccaggcacccgacgttacacgtgcggttcgcgcg
cgtctggctgcccataaggaagcgaaacaaagtcaggcgcccgaagattcggtgcctgaa
gaagcaaatgatgtgctcaatcagcaagaaaccgctgatcttccaaagaagtctcgtcgg
ggcagccgcggcggaaaacggcaagacgcgcaagatttaacgaaacaaaatcaagaagcg
aatcaggatgagcagaaagatgagcaccagcaaggagccggaaaagaagagctgaatacg
gaaaatgtatcttctgaacacggcgcgaaacgtacccggaagcgtttgcattcaaatgtg
aattccgaagattctgcgaacgattcaggaaaccagaacagtgcgcaaactcaagaagaa
tcggggacaacggttcgccggcgccgccgccgaagtgacagcagcgctgcagacgaagtg
tctgcaccgaaaggatccacccggctggaagcgaagcgtcagcgtcgaaaggaaggccgt
gaagcaggccggcggcggcactcaatcactgaatcagaatttttagcacgccgcgaagcg
gtaaaccgccagatgcttgtgcgtgaacacgacggtttaaaccaaattgctgtgattgaa
gatagtgtgcttgttgagcactatgttgcgcgccatacacaaacttcgatggttggcaat
gtgtatctgggacgagtgcagaatgtgcttccctcaatggaggcggcttttgttgatatc
ggcaaaggacgaaacgcagtgctgtattccggcgaagtcaattgggaagctgcggggttg
gagggcaagccgcggaagattgaggatgccttaaaatctggcgataccgtactggtgcag
gtaacaaaggacccaatcggacataagggtgcgcggttaactgggcagattacactcgcc
ggcagacatcttgtgcttgtgccgaacgggacaatgatgggaatttcccgcaagcttcca
gaaacggaacgttcacgcctaaagaagattttgaaacaggttgttccctccgagcacgga
gtaatcgtgcgcacagccgctgaaggcgctacggaagaacagattaagggcgatgtaaag
cgtttgattaaatcctggaaagatatcgacgcaaaatcgaagagttcgaaaaatgcgcca
tctcttttgaaaggtgaaccagagctcgcggtacgggtggttcgcgacgtatttaatgaa
gatttcaactcactgcaggtgcagggtgagaacgcctggaacactatttgggaatatgtt
catgagttgtctccggaactcgaagaacgtgtcacaaaatgggaggataaccgcgatatt
ttcatccaataccgcgtcgatgaacagctgcaaaaagcttttgaccgcaaggtgttcctt
ccgtcgggaggttccttagttattgatcgtaccgaagctatgaccgtaattgacgtgaac
accgggaagttcactggtgcgacgggcggtacgcttgaagaaactgttacgaaaaacaat
cttgaagcagccgaggaaattgtccggcaattgcggctgcgtgatattggcggaatcgtc
gttatcgattttattgatatggtacttgaagctaatcgtgatttggtgctgcggcgctta
attgaatgtcttggccgtgaccgcactcggcatcaggttgctgaagtaacctcactcggt
ttggtgcagatgacccgcaaacgggttgggcaggggctggttgaagctttttcaactaca
tgtgaagcttgtgaaggacgcggatatatcagtcatgatcatccggtagaaaaggatgag
atttttgacgaatctgattcgaaacagcttccgaagcggcgtaatgagaatttgcacccc
caaacttttgattctgaagctgaagaaaaacacgcggaggtaaaggcagcgctggcaaat
attgcggcagctgctgcgcataagcatgaagaaacgcatggtgtgaatcatggtgcgggt
gcggatgagacagaaaatttccgcaaagctgcgaaacaaaatagcggcgccggaactgat
gatgcggcaaagcgtccgaaacggcaaaagaagcgcagccgaaaatctgtgcacagtgat
tcagatgacgcaaattcgctgctgactcggcagatgaattctgatagcggcgaaagtgcg
gaaaaggcggtatcgtctgcggcggattcagctgattctcgtgttttggaagctgcttcg
caaactgctttcacagttccggaacagagagaatccggagatcaagatccagaatcagta
ccgaaacgcagacgggttagttctaccggaacaatcactccggcaagctcatcagcattc
acgattatgagctttccgttatccgggaaatcggatgagtga
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