Acidaminococcus intestini: Acin_0007
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Entry
Acin_0007 CDS
T01639
Name
(GenBank) type IIA topoisomerase
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ain
Acidaminococcus intestini
Brite
KEGG Orthology (KO) [BR:
ain00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ain03032
]
Acin_0007
03400 DNA repair and recombination proteins [BR:
ain03400
]
Acin_0007
Enzymes [BR:
ain01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Acin_0007
DNA replication proteins [BR:
ain03032
]
Prokaryotic type
DNA Topoisomerases
Acin_0007
DNA repair and recombination proteins [BR:
ain03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Acin_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
RepB-RCR_reg
Motif
Other DBs
NCBI-ProteinID:
AEQ21261
UniProt:
G4Q5G1
LinkDB
All DBs
Position
5050..6996
Genome browser
AA seq
648 aa
AA seq
DB search
MTEKDNEKTIEEEIAVHGEYGAEQIQVLEGLEAVRKRPSMYIGSISARGLHHLVYEVIDN
SIDEALAGYCDHILVEIGEDNSITVVDNGRGIPVEMHKIGKPAIEVVMTILHAGGKFGDG
GYKVSGGLHGVGVSCVNALSRRMEVEVKKDGKIYGIEFSKGKTVRPLYVKGECDAKDTGT
SVHFWPDDTIFTETVYSYETLKHRIRELAFLNKGVKIELKDDRSGADEIFHYEGGIISFV
EYINKGKEAIFNTPIYVEGERQDTIVEVAMQYTDAYTENIYTFVNNINTEEGGTHLAGLK
QALTRSINDYARKNGLLKDSEENLSGDDVREGLTCVLSLKVREPQFEGQTKTKLGNSEVR
GIVDNMVSDALNEYFEENAPTAKKIVEKAILSSRARAAARKARDLTRRKSALEVSSLPGK
LADCSSKNAEETEIYIVEGDSAGGSAKQGRDRAFQAILPLRGKILNVEKARLDKMLNNNE
IRSMITAFGCGIGDEFDLSKIRYGKIIIMTDADVDGAHIRTLLLTFFYRYMQPLIRNGNV
FIAQPPLYLIRTGKNHTYAYSDDELQKKLDEVGRQNNPYVQRYKGLGEMNPEQLWETTMD
PSKRTVLQVHLEDAASADSVFSVLMGDKVEPRRQFIEENAGKVTNLDF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaagacaatgagaaaacgatagaagaggaaatcgccgtccacggtgaatat
ggggcagagcagatccaagtcctggagggcctcgaagccgttcgcaaacggccaagcatg
tatatcggcagtatcagtgcccgtgggctccatcatttggtttatgaagtcatcgataac
tctatcgatgaggccctggccggttactgtgaccatatccttgttgaaatcggagaagat
aacagcatcaccgttgtcgataatgggcgcgggattcctgttgaaatgcataagatcggc
aaaccggccattgaagttgttatgaccatcctgcacgctggcggtaaatttggcgatggc
ggttataaggtctccggcggtcttcatggagttggtgtttcctgtgtcaacgctttgagc
cgacgcatggaagtcgaggtcaaaaaagacggcaagatttatggcattgagttcagtaag
ggtaagaccgttcgtcctctttatgtaaaaggggaatgtgatgccaaggatacgggaaca
agcgtccatttctggcctgatgacacgatctttacggaaacggtctacagctatgaaacg
ctgaagcatcgtatccgggagctggcctttctcaataagggcgtcaagattgaactgaag
gatgatcgttccggtgccgatgaaatcttccactacgaaggcggaatcatttcttttgtt
gaatatatcaacaagggcaaggaagccatcttcaatacgccgatctatgtagaaggggaa
cggcaggacaccatcgtggaagtggccatgcagtatacggatgcctacacagaaaatatc
tataccttcgtcaataatatcaatacagaagaaggtgggactcatctggccggtctgaaa
caggccttgacgagaagcatcaacgattatgcccgcaagaacggtctcttaaaggacagc
gaggaaaacctttccggtgatgacgtccgcgaaggcctgacctgtgtcctcagcttgaaa
gtccgggaaccgcagtttgaagggcagacaaagaccaagcttggcaacagcgaagtccgc
ggaatcgttgacaatatggtgagcgatgccctcaatgagtactttgaggaaaatgcaccg
acggcgaagaaaattgtagaaaaggccattctctcaagccgtgcccgagcggctgcccgc
aaggcccgtgatctgacacggcgcaagagcgcgctggaagtaagctccctgccggggaaa
ctggcggactgttccagtaagaatgcggaagaaacggaaatctacatcgtcgaaggggac
tccgctggcggcagcgccaaacagggccgtgaccgtgccttccaggccatcctgcccctg
cgcggcaaaatcctcaacgtggagaaggcccgcctggacaagatgctgaacaacaatgaa
atccgctccatgatcacggcctttggctgcgggattggcgatgaattcgatctcagtaaa
atccgttacggcaagatcatcatcatgaccgatgctgatgtcgatggggcccacatcagg
acgctgctcttgacgttcttctaccgatacatgcagcccctcatccgaaatggcaatgtt
tttattgcccagccgcccctttatctcattcgtacgggcaagaaccacacgtatgcttac
agtgacgatgaactgcaaaagaaacttgacgaggtgggccgtcagaacaatccttatgtc
cagcgttacaaagggcttggcgaaatgaacccggaacagctctgggaaacgaccatggat
ccttccaagcggacggtactgcaggtccatctggaggatgccgcttcagcggattctgtc
ttttccgtcttgatgggcgataaagtagaaccgcgccgccagttcattgaggaaaatgct
ggtaaagtaacgaatctggacttctaa
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