KEGG   Arachis ipaensis: 107613252
Entry
107613252         CDS       T04301                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
aip  Arachis ipaensis
Pathway
aip03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107613252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107613252
Enzymes [BR:aip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     107613252
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     107613252
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 SRPRB ATP_bind_1 MMR_HSR1 FtsK_SpoIIIE AAA_24 AAA_29 ABC_tran GTP_EFTU
Other DBs
NCBI-GeneID: 107613252
NCBI-ProteinID: XP_016170647
LinkDB
Position
B08:complement(43124994..43132993)
AA seq 435 aa
MAMAHSGGASSSGVKQQVKLEKESELRIEVGNDAPLRLRLLNGNAEIFGTELAPEIWLNF
PPRLKFAVFTWYGATIEMEGTTETDYTADETPMVSYVNVHAILEARRTRAKASSSGDSES
SQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGSKPTFVDLDIGQGSITIPGCIAATPIEMP
IDPVEGITLEMPLVYFFGHTTPSNNVELYKVLVKELGGMLERQFAGNAESRASGMVINTM
GWIEGVGYDLLLHATRTLKANVVLVLGQEKLYSMLRDVLKGEPKVDVVKLQRSGGVVSRN
VKVRQKARSFRIREYFYGLLNDLSPHSNIANFSDLCVYRIGGGPQAPRSALPIGAEPVAD
PTRVVPVNINRDLLHMVLAVSFAKEPEEIISSNVAGFIYVTDVDIQRKKITYLAPSAGDL
PSKFLILGSLTWLET
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggcgatggcgcacagtggcggtgcatcgagctcaggggtgaagcagcaggtgaaattg
gagaaagaaagcgagctccggattgaggttggaaacgatgctcctcttcgccttcgtctt
ctcaatggaaacgccgagattttcggcactgagcttgcacccgaaatttggctcaatttc
cctccccgactcaaattcgctgtttttacttggtatggtgctaccattgaaatggaaggt
actaccgaaactgattatactgctgatgagacaccaatggtaagctatgttaacgtgcat
gctatattagaagccagaagaactcgtgctaaagcttcatcctcgggcgattctgaatct
tctcaggggcctagagtgattgttgtaggacctactgactccggaaagagtaccttgtcg
aggatgcttcttagctgggcggctaagcagggttcgaagcctaccttcgttgacttggat
attggacagggatctataacgattcctggatgcattgctgctactccaattgaaatgccc
attgaccctgttgaaggaattactcttgagatgcctcttgtttacttttttggccataca
actccaagtaacaatgtagaattgtataaagtgctagtcaaggaacttggggggatgcta
gagagacaatttgctggaaatgccgaatctcgtgcttcgggcatggtgataaataccatg
gggtggatagagggagtaggctatgatttgctattgcatgcaactcgtacacttaaggct
aatgttgtcttagttttgggtcaggaaaaactgtacagcatgctcagagatgtcctgaag
ggagagcccaaagttgatgttgtgaaacttcaaaggtctggtggagttgtatccaggaat
gtgaaggtccgccagaaggccagaagttttaggataagagagtacttctatggccttctt
aatgatctctctccacattctaatattgctaattttagtgacttgtgcgtctatcggatt
ggtggtgggccacaggctcctcgctcagccttgccaattggagcagaacctgttgctgac
ccaacaagagttgttcctgtgaatataaaccgtgatttgctccacatggtccttgcagtc
tcatttgccaaggaacctgaagagatcatttcaagcaacgttgctggctttatctacgta
acagatgttgacattcagagaaagaagataacttaccttgcaccatccgctggagatctt
ccaagcaagtttttgatactgggatccttgacatggcttgagacatga

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