Arachis ipaensis: 107623092
Help
Entry
107623092 CDS
T04301
Name
(RefSeq) cleavage stimulation factor subunit 50 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
aip
Arachis ipaensis
Pathway
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107623092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107623092
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107623092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_WDR41
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_NOL10_N
Tricorn_N
Beta-prop_VPS8
WD_LRWD1
Mito_carr
Motif
Other DBs
NCBI-GeneID:
107623092
NCBI-ProteinID:
XP_016180719
LinkDB
All DBs
Position
B10:121734532..121740484
Genome browser
AA seq
433 aa
AA seq
DB search
MENNSWEQTLQDGKLYRHLNSLIVAHLRDSNLTQAASAVASATMTPLNVEAPPNKLLELV
AKGLAVEKDDVFKGTLSSPFCDLGAPVLPTHPGATIIDFSAVPDIKGTSKSFPKHETRHL
SEHKNIARCARFSPDGKFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRPVIRTFYDHT
QPINDLDFHPQGTILVSGAKDQTMKFFDISKTNAKRAYRVIQDTHNVRSVSFHPSGDFLL
AGTDHAIPHLYDINTFQCYLSANIPEVGPNGAINQVRYSCTGAMYVTASKDGVIRLWDGI
TANCVRSITGAHGTAEATSAIFTKDERFVLSCGKDSTIKLWEVGSGRLVKQYLGAMHTQL
RCQAIFNETEEFILSIDELNNEIVIWDAMTTEKVAKWPSNHVGAPRWIDHSPTESAFISC
GTDRSVRFWKETI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaatagctgggagcagactctgcaagatggaaaactctatcggcacctcaat
tccctaatcgtcgctcatcttcgcgacagcaatcttactcaggctgcaagtgctgtagct
tcagcaactatgacaccactgaatgtggaagctccacccaacaagcttcttgagctggtt
gctaagggtcttgcagtggagaaagatgatgttttcaaagggactttgtcgtctcctttt
tgcgacttgggtgcaccggtgctgccgactcatcctggagctaccatcattgatttcagt
gctgtgccagatataaaaggcacgtctaaaagctttccaaagcacgagacacgacacctt
tcagagcacaagaatattgccagatgtgctagatttagtcctgatgggaagtttgttgcg
actggtagtgcagatacatcaataaagctttttgaggtttcaaagatcaagcaaatgtta
cttccggatgcaaaggatggccctgtgcggcctgtaattcgaacattttatgaccacaca
caaccaataaatgatctggattttcatccacaaggtaccatcttggtttctggagctaaa
gatcaaacaatgaagttttttgatatttctaagaccaatgcaaagagagcatacagggtt
atacaggatacacacaatgttcgatctgtatcgtttcatccttctggagactttcttctc
gcaggaactgatcatgcaattccacatttgtatgatataaataccttccagtgttatcta
tcagcaaacattccagaggttggcccaaatggagccataaaccaggtcagatattcttgt
acaggtgccatgtatgttacggcatctaaagatggtgttattcggttgtgggatggcatc
actgctaattgtgtgcgctcgataactggagcacatggaacagctgaggctacaagtgca
atttttacaaaggatgaaaggtttgtgctctcctgtggtaaggattctaccataaagctt
tgggaagttggttctggaagattagtcaaacaatatcttggagccatgcatacacagcta
agatgccaggcaattttcaacgagacagaagagtttattctttccatagatgaactgaac
aatgagatcgttatctgggatgcaatgacaacagaaaaagtagcaaagtggccttctaat
catgtcggcgcaccccgctggatcgatcactcgccaacagagtcggcttttatttcctgt
ggaactgataggtcagttaggttctggaaggaaactatataa
DBGET
integrated database retrieval system
