Arachis ipaensis: 107626458
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Entry
107626458 CDS
T04301
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aip
Arachis ipaensis
Pathway
aip00040
Pentose and glucuronate interconversions
aip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107626458
Enzymes [BR:
aip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107626458
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107626458
NCBI-ProteinID:
XP_016184826
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Position
B02:108260703..108264641
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AA seq
514 aa
AA seq
DB search
MSNPYDHGASPFMHLSERERERVKLFQRSRRIMFQRRCIVVTITYVLLGCIIVDHGRATM
VNLTLQGQHPNPEALVTQLHSKINASIARREMLASSSSCLTGNPIDDCWKCDPNWAQNRQ
RLADCAIGFGQNAKGGKGGEFYIVTDSSDNDAVNPKPGTLRYAVIQNEPLWIVFPSNMMI
KLSQELIFNSFKTIDGRGADVHIVGGGCITLQYISNVIIHNIHIHHCHPSGNAMVRSSPE
HYGYRTESDGDGISIFGSHDIWIDHCTLSRCKDGLIDAVMGSTAITVSNNHFSHHNDVML
LGHSDHYLPDSAMQVTIAFNHFGEKLVQRMPRCRLGYVHIVNNDFTAWQMYAIGGSGSPT
INSQGNRYTAPDNSFAKQVTKRLDVGEGEWTGWNWRSEGDVMVNGAFFVPSGEGAEVKYE
KAYSVEPKSADRISLLTMSAGVLGVARDNNLGMWSRGPNDGGSYISTNGPEFTDEMSKAA
MLFPPSHTITFVSVFVTMLCLLSHTITPLITLVL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccctatgatcacggagcttctccatttatgcacctaagtgagagagagaga
gagagagtgaaactcttccaaagaagcagaagaataatgttccaaagaaggtgcattgtg
gtaacaataacatatgtattattgggatgcattattgtggatcatggaagagcaacaatg
gtgaatctcacactccaaggacaacatccaaaccctgaagctcttgttacacaacttcat
agtaagattaatgcttcaatagcaagaagggagatgttagcatcatcatcatcatgccta
acagggaaccccattgatgattgctggaaatgtgacccaaattgggcccaaaacagacaa
aggctagccgattgcgcaattgggttcggtcaaaacgcaaaggggggaaaaggtggcgag
ttctacatagtaaccgattcgtcagacaatgatgctgtaaaccctaaacccggaacccta
agatatgccgtgattcaaaatgagccactttggatagtgtttcctagtaacatgatgatt
aagctttcacaagaactcatattcaatagcttcaagaccattgatgggcgtggtgctgat
gtgcacattgttggtggagggtgcattactcttcaatatattagcaatgttatcatacat
aacattcacattcaccattgtcacccctcaggtaatgctatggtgcgatcgagtccagag
cactatggataccgcactgaatcggacggtgatggcatctccatatttggatcgcatgac
atctggatcgatcactgcactctatctcgttgcaaggatgggcttattgatgcagttatg
ggctcaactgccatcactgtgtccaacaaccacttttctcatcacaatgacgtaatgctc
ttgggccatagtgaccactacttacctgactcagccatgcaggttaccattgcctttaac
catttcggcgaaaaactcgtccagcgcatgccacgttgcaggctaggatatgttcacata
gtcaataacgacttcactgcttggcagatgtatgcgatcgggggcagtggatcccctact
attaatagtcaggggaatcgatacactgctcccgacaactcatttgccaagcaagtgaca
aagcggttggatgtcggggaaggcgagtggacagggtggaattggaggtcagaaggggat
gtgatggtgaatggagcattttttgttccatcaggggaaggtgctgaggttaagtatgag
aaggcttatagtgtggagcctaagtctgctgatcgcatttcattgcttactatgtctgct
ggagttcttggtgtggctagggacaataaccttggcatgtggagtagaggacccaacgac
ggtggcagttatatttcaacaaacggtccagaattcactgatgaaatgtcaaaggctgca
atgctgtttccaccttcacatactatcacatttgtatctgtttttgttacaatgctctgc
ttgttatctcacacaattactcccctaataacattagtactataa
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