Arachis ipaensis: 107643980
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Entry
107643980 CDS
T04301
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aip
Arachis ipaensis
Pathway
aip00040
Pentose and glucuronate interconversions
aip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107643980
Enzymes [BR:
aip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107643980
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107643980
NCBI-ProteinID:
XP_016203229
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All DBs
Position
B05:complement(122436297..122438639)
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AA seq
447 aa
AA seq
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MAKVYNLFLSLCLAAMIPAFQANIFENTTYAKQHINLVDNQYWKERAIIARKLSEEAYFP
DPHALSRNFSSIITEDIGGSKHVRRNLNGQRAGVTCEATNNIDRCWRCDPNWADNRQKLV
NCVQGFGRNTTGGKGGPIYIVTSPADNDMVNPKPGTLRHAVTRDGPLWIIFAHSMNIRLN
QELMVSSNKTIDGRGVDIYITKGAGITLQYVNNVIIHGIKIHDIVPGTGGLIRDSESHFG
FRTRSDGDGISIFGASNIWIDHVSMRKCSDGLIDAIMGSTAITISNSHFTDHNDVMLFGA
NDQHTIDKVMQITLVFNHFGKRLIQRMPRCRFGFVHVVNNDYTHWEMYAIGGSSKPTIIS
EGNRFVAPDNNNAKEVTKRVTNDDWKNWQWRSINDEFVNGAFFVQSGPELVKRPFSSKDM
IAGKDGSYVQRLTSFAGSLKCRVGQPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtgtacaacttgttcctttctttgtgtttggctgccatgataccagccttc
caagccaatatctttgagaatactacatatgcgaaacaacatatcaacttggttgataat
caatactggaaagaaagggcaataattgctaggaagcttagcgaagaagcatattttcct
gatccacatgcactttctagaaacttctcatctattattactgaagacataggtggtagc
aagcatgtaagaaggaacttgaatggtcaaagggcaggagttacatgtgaggcaaccaat
aacattgacagatgttggaggtgtgaccccaattgggcagataatcgccaaaaacttgta
aattgtgttcaaggttttggaagaaatactactggaggaaagggaggtccaatctacatt
gttactagtcctgctgacaatgacatggttaatccaaaaccaggtacccttcgccatgca
gtcacaagagatggacctttgtggattatctttgctcatagcatgaatattagactcaac
caagagctcatggtgtctagtaacaagaccatcgacggaagaggagttgatatctacatt
actaagggtgcaggcatcaccctccaatacgtcaataatgtcatcatccatggaatcaag
attcatgatattgttccgggcaccggtggacttattagagattctgagagtcattttgga
tttaggacacgcagtgatggtgatggaatctccatctttggtgccagtaatatttggatt
gaccatgtttccatgagaaaatgctctgatggtcttattgacgccattatgggatccacg
gctattaccatctctaatagtcatttcacagaccataatgatgtgatgctctttggtgcc
aatgaccaacacacaattgataaggtgatgcaaatcaccctagttttcaaccactttggc
aagagattaatccaaagaatgccaaggtgcagatttggatttgttcatgttgtcaacaac
gattatactcattgggaaatgtatgccattggtggtagcagtaagcctacaattattagt
gaaggaaatcggttcgtggctcctgataataacaatgctaaagaggtcacgaagagagta
accaatgatgattggaagaattggcaatggagatcaatcaacgatgagtttgttaatgga
gcatttttcgtacaatctggacctgaactagtaaagaggccattctcaagcaaggacatg
attgcaggaaaggatggttcatacgtgcaaagacttacttcctttgctggctcccttaaa
tgtagagttggtcaaccttgctag
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