Argopecten irradians (bay scallop): 138319135
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Entry
138319135 CDS
T10542
Name
(RefSeq) lysosomal cobalamin transporter ABCD4-like isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr02010
ABC transporters
airr04146
Peroxisome
airr04977
Vitamin digestion and absorption
airr04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138319135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
138319135
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
138319135
04980 Cobalamin transport and metabolism
138319135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138319135
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
airr02000
]
138319135
Enzymes [BR:
airr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
138319135
Membrane trafficking [BR:
airr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
138319135
Transporters [BR:
airr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
138319135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
nSTAND1
NACHT
AAA_29
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
138319135
NCBI-ProteinID:
XP_069118172
LinkDB
All DBs
Position
3:complement(55560828..55595145)
Genome browser
AA seq
626 aa
AA seq
DB search
MVDVNKQTKHSSFKFDIKFLKRFLRLFGWMFPSLCSKQSLLFLFLLCLGLLEQVVVFNIG
YVPSKYYKLFGDKDYKAFVHETILALMLIVAQSLIKSTITFVGSILYILWRGVVTKKLHK
KYFKDYLYYKINVLSSTDNPDQRITQDVERLCFFFSQILSPLIISPFTIGYYIYQCIKKT
GYLGPVGVLGFFLVGTVFNKLLMSPVVNLVFKREKMEGNFRFKHMHMRVNAESAAFYKAG
AIEMNKTDTQLDNLLSVQKKLVIRKYFLNISINLSDYLGSILSYLLLALPVFNGSYDDLS
AADLSSLISQNAFVIIYLISCFTKLIDLSVQVSEMAGNAHRVGELIEALGKLSAEDDTVY
NFLDPDSGGDAGIPLSDLSVVPSSGDGASFGSVHMSEKALTIQDLTYGPPDSHLILCRNL
SFQLESGVNTIVKGDSGCGKSSLLRVIAGLWPTVTGSVKKHIPMEHKKILFLPQKPYFTD
GSLREQVMYPMQDILSGSVSAENQKITQYLEYVGLKDILDRVGDLDNNIDWNWYDELSPG
EMQRLSFVRLFYHQPKFAVLDEATSQVGFAAEEKMYEMCSRLGITVLSVGHRQSLHKYHV
MEIVLDGQGGWRIQPITDNVLSSSTC
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgtaaataaacaaacgaaacattcaagcttcaaatttgatataaagtttctg
aagcggttcttacgtctgtttggatggatgttcccaagtctttgtagtaaacagagcctt
ctcttcctcttcctcctatgtctgggtctcctagaacaagtggtagtgtttaatatcggc
tatgtgccctctaagtactacaaattgtttggtgacaaggattataaagcgttcgttcat
gaaacaatcctggccttaatgctgatagtcgcacagtcactgataaagagtaccatcaca
ttcgttggttccatcctgtacatcctttggcgaggagtggtgaccaagaaattacacaag
aagtacttcaaagattacttgtactataagattaatgtgctcagttccacagacaatcct
gaccagcgtataactcaggatgtggaacgactttgttttttcttcagccaaatattatca
cctttgattatctccccctttaccataggatattatatataccaatgtatcaaaaagaca
ggataccttggtccagtaggagtcctaggctttttcctggtaggaactgtattcaacaag
ttgttaatgtcaccagtcgtcaaccttgtatttaagagggaaaagatggagggcaatttt
aggtttaaacacatgcatatgagggtcaatgctgagtctgcggccttctataaagctggt
gctatagaaatgaacaaaactgatacacagcttgacaaccttctctccgtccaaaagaag
ctagtcatcagaaagtattttctaaatatctctataaacctaagtgattacctgggcagt
atcctgagttaccttttgttggccctgcctgtcttcaatggatcctatgatgatctgtcc
gctgcagacctttcttctcttatcagccagaatgcatttgtaatcatttacctgatcagt
tgttttaccaaactgatagatctgtcagtacaagtgtcagagatggcagggaatgcccat
agagtaggggagctaatagaagccttaggaaaactgagtgcagaagatgacacagtttac
aactttttagatccagacagtggtggggatgctggtattcctttatctgacctatctgtt
gtacccagcagtggcgacggagcttccttcggcagtgtacacatgagtgagaaggctctc
accatacaggacctgacctatggaccaccagacagtcatctcatcctctgtagaaatctc
tccttccagttggagtccggagtgaataccatagtgaaaggagacagtggttgtggcaag
agttctttactgagggtgatagcagggctatggcctacagttacaggatctgttaaaaaa
cacattcccatggaacacaaaaagatactatttctgcctcagaaaccttacttcactgat
ggatcactgagagagcaggtgatgtaccctatgcaggatatcctctcaggctcagtgtca
gcagaaaaccagaagatcacacagtacctagagtatgttggattgaaggacattttggat
cgggttggtgaccttgacaataacattgactggaactggtatgatgaattgtctccagga
gagatgcagagactgtcatttgttcgtctgttttaccatcagccaaaatttgcagtgtta
gacgaggcaactagtcaggtcggttttgcagctgaggagaagatgtacgagatgtgtagt
cgattaggcatcacagtgctgagtgttggtcaccgtcagagtcttcacaaataccatgtg
atggagattgtgctcgatggtcagggaggctggagaatacaaccaatcacagacaatgtt
ttatcatcaagcacctgctga
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