Argopecten irradians (bay scallop): 138322796
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Entry
138322796 CDS
T10542
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
airr03037
]
138322796
Cilium and associated proteins [BR:
airr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
138322796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_EML
WD40_Prp19
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
EIF3I
PPR_2
TPR_IFT80_172
TPR_COPA_B
WDR90_beta-prop_4th
TPR_2
TPR_GEMI5
TPR_1
Beta-prop_IFT122_1st
DUF2524
Relaxase_C
Motif
Other DBs
NCBI-GeneID:
138322796
NCBI-ProteinID:
XP_069123005
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All DBs
Position
5:8787161..8809255
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AA seq
1494 aa
AA seq
DB search
MAVYFDHRLESDRSGINTDATWFSGSPILAVNSYSDENGGTVNLFLDEGEKLLNVPLHRA
GQATSVAWHPTKKIVAVGWENGELLVWNEVDHELFEGLPLHKSAITVLHWSSSGTRLSSG
DKAGVLMVWKSDGKGRLQQNPLYQHHIQEPISKILYRPIPPPDPEHDIAALARAAVSGDE
KALDLFTWKSKGKGNTKMTSMFGPTEALTFFVGGESGGVYYMNENGQCTQIFSVDTAILR
LLYYEEKNVLITVTENMMLTQHAIMPEGDAKELMRVKMSGRGENPVICWAGKSTIATATG
EGVVRMWDLDHEENYILSLDGHGSYDSSENIMCISYCEEKGVLAGGTNLGNIALWRYSPP
LGSRVVDGEHKWKLQAPATVEGSIRQLSWGSKKNLLAVNTIANVFMLNEQTMSSSFSGQT
AVVQFGPSSLALEMFTTGTHHDLKTDIQVKGVCTTKDTLAVWNGRKVITYDYSEDRTIIK
GAGAFQTETMEVRLYEQNVYCVETGKVQVRTHQGTVKQVINFSDAEGQPVSLDVCGTSLV
IATNNGVIRVYDLSRREAKPTSQPKNLGDVIPGFNGIISARCNSNGSKVSVLVKNTTSHA
DPKLYFWDVESDIVSYFNFESGRGEQDDFPPEQIEGVEGDTNDAERGKIQAAADIAGRYP
MTHYWDPHDTKLIMCEAKVMASAVEKKEEKKRHSLTKAVEEGPVEVMLVSLFCTPENGIL
IQDSFQMPDNFQALLGIEVPYYYFIKKSENLKDEEQDKDDGPQPENLIKSDTVIQPKLVA
RKTMRDFVGLENSDKNTREAMMNFSYYLTIGNMDEAFKSIKLIKSESVWENMAKMCVKSR
RLDVASVCLGNMGHARGAKALREAMKEPELDAKVAVLAMQLGLKEDAERLLKNCKRYDLL
NEFYQSSGQWIKALETAEMYDRIHLRATYYNHAKHLEVRGDYSDAIPNYEKSDTHRFEVP
RMLFDEPEALEQYIGRHKDKALHKWWAQYMESTGEMDAALQYYETAQDFLSLVRVYCYCG
KMEKASEICNETGDRAACYHLGRQYENQDLIKEAIHFFQRAQAYGNAIRLCKEHGYEDQL
LNLALLGRPEDMMEAARYYEQKQGSQDKAVMLYHKAGNFSKALDLSFRSKQFGALQMISG
DLDERADPELLQRCGDFFMDNGQYDKAVDLLAIGKKYWEALKICMDQHVEISEDLAEKLT
PSKEDMGSDTMERVKILEAIAEVCMHQGQYHLATKKFTQAGNKIKAMKALLKSGDTEKIT
FFAGVSRQKEIYVMAANYLQSLDWRKDPEIMKNIIGFYTKGRALDSLAAFYDACAQVEID
EYQNYDKALGALGEAYKCLSKTKMNDEMLQEEKLTRLKNKITLIKKFVTARRAYEENPED
TIKQCQVLLEEPNLDDSVRMGDVYGLIIEHYARRERWKAAYSAMEEMKSRIPALNMAYYV
NMRTIEAVHRALDIPLSRTITSKMNGIYGGGGDEEDGEVVEEEVDQMYTGGDDV
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatattttgatcatcgtctggaatctgaccgatctgggattaacacagatgca
acatggttcagtggctcccctatccttgctgtcaattcatacagtgatgaaaatggtggc
acagtcaatctgtttttggatgagggtgaaaaattactgaatgttcctttacaccgtgcg
ggtcaagcaacgtcagtggcatggcatccaactaagaaaattgtggcagttggctgggag
aatggagagttacttgtttggaatgaagtggatcatgaattgtttgaaggcttaccactg
cacaaatctgccattactgtattacactggagctcctctggtaccaggttatcctcagga
gacaaggctggtgtactaatggtttggaagtcagatgggaaaggccgtttacaacagaac
cctctgtaccaacaccatatccaggaacccatcagtaaaatactgtacagacctatccct
ccaccagatcccgaacacgatatagctgcacttgctagagctgcagttagtggggatgag
aaagcattagatctattcacatggaagtccaagggtaaaggcaataccaagatgacatcc
atgtttggtccaactgaagccctgactttcttcgtaggtggagaaagtggaggtgtatac
tatatgaatgaaaatggacagtgtacacagatattttcggtggataccgccatcctgcga
ctgttgtactatgaagaaaagaatgtgctgatcacagtaacagagaacatgatgctcaca
cagcacgctataatgccagagggtgatgctaaggagctaatgagggtgaagatgagtggg
aggggagagaacccagtgatttgctgggctggtaaaagtaccattgccacggctacagga
gaaggtgttgtaaggatgtgggatctagaccatgaagaaaactatatactttccttggat
ggacatggtagctatgactcatcagaaaacatcatgtgtatcagttactgtgaggaaaaa
ggagtacttgctggaggcacaaaccttggtaacatagccctttggagatattccccgccc
ctggggagtcgagtagtagatggggagcacaagtggaagctgcaggcaccagctactgtg
gaaggcagtatccgacagctctcttggggatctaagaagaacctactagctgtaaatacc
attgccaatgtgttcatgctcaatgagcagactatgagctcaagtttttctggtcagacg
gcagtggtacagtttggccccagttccttagccctggagatgttcactaccgggacacac
cacgatctcaaaacagacatccaagttaaaggtgtctgtacaaccaaggataccttagca
gtgtggaacggccgtaaagtgatcacatatgactattctgaggacagaactatcatcaag
ggagcaggagcatttcaaactgaaactatggaggtgcgactttatgaacagaatgtgtac
tgtgtagaaacgggcaaggttcaagtccgcacccatcagggtacagttaagcaggtgata
aacttctctgacgctgagggtcagcctgtcagtctggacgtatgtggaacgtcactagtc
atcgctacaaacaacggagtcatccgtgtgtatgatttatctagaagagaagctaaacca
acaagccaaccaaagaatttaggagatgttatccctggtttcaatggaatcatatctgcc
aggtgtaattcaaatgggtcgaaagtcagtgttcttgttaaaaatactacaagccatgca
gatcccaagctttacttttgggatgtggaatcagatattgtttcttacttcaactttgag
agtggacgtggggagcaggatgactttcctcctgagcaaatagagggtgtagagggagac
acaaatgatgcagagagaggaaagatccaggctgcagctgacatcgctggaaggtaccct
atgacccattactgggacccacatgacaccaagctgatcatgtgtgaagccaaggtgatg
gccagtgctgtggagaagaaagaggaaaagaaacgccactctctgactaaagctgttgag
gaagggccggtggaggtgatgctggtgtcactgttctgtacaccagagaatggtatcctg
atccaggacagtttccagatgcctgataacttccaggccctgctcggtatagaagtacca
tactactacttcatcaaaaagtctgagaatctcaaagatgaggagcaggataaagatgat
ggtccacagccagaaaatcttattaagtcagacactgtcatacagcctaaactggtggca
aggaaaaccatgcgtgactttgtagggttggagaacagcgataagaacacgagagaggct
atgatgaacttcagttattatctcaccatcggtaacatggacgaggcattcaagtctatc
aaactcatcaaaagtgaatcggtgtgggagaacatggctaagatgtgtgtgaagagtcgg
cgtctggacgtggccagtgtatgtctaggtaacatgggccatgctcgtggtgctaaagct
cttagagaggccatgaaggaaccagaactggacgccaaggtggcggtactggccatgcaa
ctagggctgaaggaagatgcagaaagattactgaagaattgtaaacgctatgatttactg
aatgaattctaccaatcatctggacagtggataaaggcattagaaactgcagaaatgtat
gatagaatccatctcagagccacatattacaaccatgcaaaacacttagaagtcagggga
gactactctgatgctattccaaattatgagaagtcggatactcatcgttttgaagtgcct
aggatgttatttgatgagccagaggcattagaacagtacatcggcagacataaagacaag
gcgttacacaagtggtgggcccagtatatggagagtacaggtgagatggacgccgcccta
cagtactatgagacagctcaggacttcctctctctggtcagagtctactgctactgtggc
aaaatggagaaggcgtccgaaatctgtaatgagactggtgatagagctgcctgttaccac
ttaggtagacagtatgaaaaccaagacctcatcaaagaggctatacactttttccagcga
gcacaagcttatggaaatgccatccgtttgtgtaaggaacatggctatgaagatcagctg
ctgaatctggcgttactaggacgtcctgaggatatgatggaggccgctcgctactatgaa
cagaaacaaggatcacaggacaaggctgtcatgctctatcataaggcaggaaatttctcc
aaagcgttagatctatccttccgatccaaacagtttggagcattacaaatgatttctgga
gacttggatgagcgtgcggatcctgaattattacaaagatgtggtgacttcttcatggac
aatggtcaatatgacaaggcagtggatctcctagccattggcaaaaagtactgggaagcc
ctgaagatctgtatggaccagcatgtagaaatcagtgaagacctagcggaaaagctcaca
cccagcaaggaagatatgggtagtgatacaatggagagggtgaagatcctcgaggccata
gcagaggtgtgcatgcaccaaggacagtaccacctcgccacaaagaagttcactcaggct
ggcaacaagatcaaggctatgaaagcattgcttaagtctggagacacggagaagattacc
ttcttcgccggggtgtctcggcagaaagagatctatgtgatggctgcaaattaccttcag
tccttggattggagaaaagatccagaaatcatgaaaaacattatcggtttttacaccaaa
gggagagcactggattccctggcagccttctacgatgcttgtgctcaggtggagatagat
gagtaccagaactatgataaggccctgggcgctctgggggaggcctacaagtgtctcagt
aagaccaagatgaacgatgagatgctacaagaggagaaactcacacgcttaaagaacaaa
atcacgctaattaagaaatttgtgacagctagaagggcgtatgaagagaatcccgaggat
accatcaaacagtgtcaggtgttactggaggaacctaacttagacgactctgtaagaatg
ggagacgtctatggtctcattattgaacattatgcaaggagagaacgctggaaggcagcg
tattctgctatggaagagatgaagagtcggattccagcactaaacatggcatactatgta
aacatgagaacaattgaggcggtacaccgagccttggatatccccctcagtcggactatc
actagtaagatgaatggtatatacggagggggcggggatgaggaggatggtgaagtagtg
gaagaggaggtcgaccaaatgtacacaggtggagacgatgtatga
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