KEGG   Argopecten irradians (bay scallop): 138327986
Entry
138327986         CDS       T10542                                 
Name
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr04120  Ubiquitin mediated proteolysis
airr04137  Mitophagy - animal
airr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    138327986
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    138327986
   04137 Mitophagy - animal
    138327986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:airr04121]
    138327986
Ubiquitin system [BR:airr04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   138327986
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2
Other DBs
NCBI-GeneID: 138327986
NCBI-ProteinID: XP_069130630
LinkDB
Position
7:26058242..26063072
AA seq 990 aa
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDHQQRLIFAGKQLE
DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEG
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP
SDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAG
KQLEDGRTLSDYNIQKESTLHLVLRLRGGM
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaaaactttgacaggaaagaccatcacacttgaggtggaaccctcg
gacagtattgagaatgtcaaggccaagatccaggacaaagaaggcattcccccagatcag
caacgtctcatctttgccggtaaacagctggaagatggacgcacattgtctgactacaac
atccagaaagaatccacacttcacttggtattgcgtctccgtggaggtatgcagatcttt
gtcaaaactttgacaggaaagaccatcacacttgaggtggagccctcagacagtattgaa
aatgtcaaggccaagatccaggacaaagaaggcattcccccagatcagcaacgtctcatc
tttgccggtaaacagctggaagatggacgcacattgtctgattacaacatccagaaagaa
tccacacttcacttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttg
acaggaaagaccatcacacttgaggtggagccctcagacagtattgagaatgtcaaggcc
aagatccaggacaaagaaggcattcccccagatcagcaacgtctcatctttgccggtaaa
cagctggaagatggacgcacattgtctgactacaacatccagaaagaatccacacttcac
ttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagacc
atcacacttgaggtggagccctcggacagtattgagaatgtcaaggccaagatccaggac
aaagaaggcattcccccagatcagcaacgtctcatctttgccggtaaacagctggaagat
ggacgcacattgtctgactacaacatccagaaagaatccacacttcacttggtattgcgt
ctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagaccatcacacttgag
gtggagccctcagacagtattgaaaatgtcaaggccaagatccaggacaaagaaggcatt
cccccagatcagcaacgtctcatctttgccggtaaacagctggaagatggacgcacattg
tctgattacaacatccagaaagaatccacacttcacttggtattgcgtctccgtggaggt
atgcagatctttgtcaaaactttgacaggaaagaccatcacacttgaggtggagccctca
gacagtattgagaatgtcaaggccaagatccaggacaaagaaggcattcccccagatcag
caacgtctcatctttgccggtaaacagctggaagatggacgcacattgtctgactacaac
atccagaaagaatccacacttcacttggtattgcgtctccgtggaggtatgcagatcttt
gtcaaaactttgacaggaaagaccatcacacttgaggtggagccctcggacagtattgag
aatgtcaaggccaagatccaggacaaagaaggcattcccccagatcagcaacgtctcatc
tttgccggtaaacagctggaagatggacgcacattgtctgactacaacatccagaaagaa
tccacacttcacttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttg
acaggaaagaccatcacacttgaggtggagccctcggacagtattgagaatgtcaaggcc
aagatccaggacaaagaaggcattcccccagatcagcaacgtctcatctttgccggtaaa
cagctggaagatggacgcacattgtccgactacaacatccagaaagaatccacacttcac
ttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagaca
atcacacttgaggtggagccctcggacagtattgagaatgtcaaggccaagatccaggac
aaagaaggcattcccccagatcatcagcaacgtctcatctttgccggtaaacagctggaa
gatggacgcacattgtccgactacaacatccagaaagaatccacacttcacttggtattg
cgtctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagaccatcacactt
gaggtggaaccctcggacagtattgagaatgtcaaggccaagatccaggacaaagaaggc
attcccccagatcagcaacgtctcatctttgccggtaaacagctggaagatggacgcaca
ttgtctgactacaacatccagaaagaatccacacttcacttggtattgcgtctccgtgga
ggtatgcagatctttgtcaaaactttgacaggaaagaccatcacacttgaggtggagccc
tcggacagtattgagaatgtcaaggccaagatccaggacaaagaaggcattcctccagat
cagcaacgtctcatctttgctggtaaacagctggaagatggacgcacattgtccgactac
aacatccagaaagaatccacacttcacttggtattgcgtctccgtggaggtatgcagatc
tttgtcaaaactttgacaggaaagaccatcacacttgaggtggaaccctcggacagtatt
gagaatgtcaaggccaagatccaggacaaagaaggcattcccccagatcagcaacgtctc
atctttgccggtaaacagctggaagatggacgcacattgtctgactacaacatccagaaa
gaatccacacttcacttggtattgcgtctccgtggaggtatgcagatctttgtcaaaact
ttgacaggaaagaccatcacacttgaggtagagccctcggacagtattgagaatgtcaag
gccaagatccaggacaaagaaggcattcccccagatcagcaacgtctcatctttgctggt
aaacagctggaagatggacgcacattgtccgactacaacatccagaaagaatccacactt
cacttggtattgcgtctccgtggaggaatgtga

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