Argopecten irradians (bay scallop): 138327986
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Entry
138327986 CDS
T10542
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
airr04137
Mitophagy - animal
airr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138327986
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138327986
04137 Mitophagy - animal
138327986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138327986
Ubiquitin system [BR:
airr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
138327986
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
138327986
NCBI-ProteinID:
XP_069130630
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Position
7:26058242..26063072
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AA seq
990 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDHQQRLIFAGKQLE
DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEG
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP
SDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAG
KQLEDGRTLSDYNIQKESTLHLVLRLRGGM
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaaaactttgacaggaaagaccatcacacttgaggtggaaccctcg
gacagtattgagaatgtcaaggccaagatccaggacaaagaaggcattcccccagatcag
caacgtctcatctttgccggtaaacagctggaagatggacgcacattgtctgactacaac
atccagaaagaatccacacttcacttggtattgcgtctccgtggaggtatgcagatcttt
gtcaaaactttgacaggaaagaccatcacacttgaggtggagccctcagacagtattgaa
aatgtcaaggccaagatccaggacaaagaaggcattcccccagatcagcaacgtctcatc
tttgccggtaaacagctggaagatggacgcacattgtctgattacaacatccagaaagaa
tccacacttcacttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttg
acaggaaagaccatcacacttgaggtggagccctcagacagtattgagaatgtcaaggcc
aagatccaggacaaagaaggcattcccccagatcagcaacgtctcatctttgccggtaaa
cagctggaagatggacgcacattgtctgactacaacatccagaaagaatccacacttcac
ttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagacc
atcacacttgaggtggagccctcggacagtattgagaatgtcaaggccaagatccaggac
aaagaaggcattcccccagatcagcaacgtctcatctttgccggtaaacagctggaagat
ggacgcacattgtctgactacaacatccagaaagaatccacacttcacttggtattgcgt
ctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagaccatcacacttgag
gtggagccctcagacagtattgaaaatgtcaaggccaagatccaggacaaagaaggcatt
cccccagatcagcaacgtctcatctttgccggtaaacagctggaagatggacgcacattg
tctgattacaacatccagaaagaatccacacttcacttggtattgcgtctccgtggaggt
atgcagatctttgtcaaaactttgacaggaaagaccatcacacttgaggtggagccctca
gacagtattgagaatgtcaaggccaagatccaggacaaagaaggcattcccccagatcag
caacgtctcatctttgccggtaaacagctggaagatggacgcacattgtctgactacaac
atccagaaagaatccacacttcacttggtattgcgtctccgtggaggtatgcagatcttt
gtcaaaactttgacaggaaagaccatcacacttgaggtggagccctcggacagtattgag
aatgtcaaggccaagatccaggacaaagaaggcattcccccagatcagcaacgtctcatc
tttgccggtaaacagctggaagatggacgcacattgtctgactacaacatccagaaagaa
tccacacttcacttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttg
acaggaaagaccatcacacttgaggtggagccctcggacagtattgagaatgtcaaggcc
aagatccaggacaaagaaggcattcccccagatcagcaacgtctcatctttgccggtaaa
cagctggaagatggacgcacattgtccgactacaacatccagaaagaatccacacttcac
ttggtattgcgtctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagaca
atcacacttgaggtggagccctcggacagtattgagaatgtcaaggccaagatccaggac
aaagaaggcattcccccagatcatcagcaacgtctcatctttgccggtaaacagctggaa
gatggacgcacattgtccgactacaacatccagaaagaatccacacttcacttggtattg
cgtctccgtggaggtatgcagatctttgtcaaaactttgacaggaaagaccatcacactt
gaggtggaaccctcggacagtattgagaatgtcaaggccaagatccaggacaaagaaggc
attcccccagatcagcaacgtctcatctttgccggtaaacagctggaagatggacgcaca
ttgtctgactacaacatccagaaagaatccacacttcacttggtattgcgtctccgtgga
ggtatgcagatctttgtcaaaactttgacaggaaagaccatcacacttgaggtggagccc
tcggacagtattgagaatgtcaaggccaagatccaggacaaagaaggcattcctccagat
cagcaacgtctcatctttgctggtaaacagctggaagatggacgcacattgtccgactac
aacatccagaaagaatccacacttcacttggtattgcgtctccgtggaggtatgcagatc
tttgtcaaaactttgacaggaaagaccatcacacttgaggtggaaccctcggacagtatt
gagaatgtcaaggccaagatccaggacaaagaaggcattcccccagatcagcaacgtctc
atctttgccggtaaacagctggaagatggacgcacattgtctgactacaacatccagaaa
gaatccacacttcacttggtattgcgtctccgtggaggtatgcagatctttgtcaaaact
ttgacaggaaagaccatcacacttgaggtagagccctcggacagtattgagaatgtcaag
gccaagatccaggacaaagaaggcattcccccagatcagcaacgtctcatctttgctggt
aaacagctggaagatggacgcacattgtccgactacaacatccagaaagaatccacactt
cacttggtattgcgtctccgtggaggaatgtga
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