Achromobacter insolitus: BUW96_20995
Help
Entry
BUW96_20995 CDS
T04671
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ais
Achromobacter insolitus
Pathway
ais03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ais00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BUW96_20995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ais03400
]
BUW96_20995
DNA repair and recombination proteins [BR:
ais03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUW96_20995
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BUW96_20995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
SMC_N
AAA_16
AAA_21
nSTAND1
UvrA_DNA-bind
RsgA_GTPase
AAA_18
AAA_22
Viral_helicase1
AAA_33
NACHT
AAA_25
nSTAND3
DUF4350
ATPase
AAA_23
DnaJ_CXXCXGXG
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
APX77076
LinkDB
All DBs
Position
4596626..4602388
Genome browser
AA seq
1920 aa
AA seq
DB search
MSSQIRIVGARQNNLKNLDLTIATGELVVVTGVSGSGKSSLAFDTLYAEGQRRYVETFSP
YARQFLDRMDKPQVDRIEGILPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARGAKLY
CRGCGKVVRRDTPDSIYHSLAERAAVAGDPRLVVTFPIAVPSNFTEEEVRGFLEQQGYTR
VHAEENAAPRAAAPAKGAKKAKAAKSATESRRILHVIQDRFRFAGTERERVMEALDTALR
MGAGHLAVYVMDAEGGNAHIWKYSDRLHCADCDIEYTDPLPSSFSFNSPLGACEACRGFG
RVIGIDFGLVIPDENKTLLEGAIKPWTTPSYKECQDELQKYAPKAGVPLGVPWKKMSEEH
KRWVLYGTPDWKGGNDAWKHQWYGVQRFFDWLETKAYKMHVRVLLSKYRSYTPCPTCNGA
RLKPDALLWRLGTKEEADTVLPPDDGRYKRFMPVGANWSREQLDGLGGLSIHDVMLLPIE
RVRLFFDTLSFSGALDAATDLLMTEVRARLKFLCDVGLGYLTLDRQSRTLSGGEVQRINL
TTALGTSLVNTLFVLDEPSIGLHPRDMHRVVEVMHRLRNAGNTLVVVEHDPQVMVAADRI
IDIGPGPGERGGQIVFDGTPAKLRTARTLTGDYLGGRQRVEAPRPMPVAANTPRLLLEGV
SAHNLKNVSVELPLGRLVCVTGVSGSGKSTLVQDVLYPALLKQKGKPSEAPGAFERLLGA
EQIADVVMVDQTPIGKTARSNPASYVGAFDAIRKLFAQAPLARERAYTAGTFSFNGGDGR
CPTCGGTGFEHVEMQFLSDVYLRCPDCDGKRFRPEVLEVRVEHLGKSASIDEVLEMTVSE
ALDFFKGLRDVQTGLAPLADVGLEYVRLGQPVPTLSGGEAQRLKLAGHLAEAARSGISTA
KVAKKGSLFLFDEPTTGLHFDDVARLMRAFRKLLAAGHTLLVIEHNLDVIRAADWLIDLG
PEGGDAGGMVIGTGTPQDLMDNPKSHTGAALRDYDVSILPADVVVSTDADAQEVEQAGLT
ARIAEPGETYAADVGKPLQSIMRERRQANMAIEIRNAREHNLKNVSVEIPRDKFTVITGV
SGSGKSTLAFDILFNEGQRRYLESLNAYARAIVQPAGKPDVDAIFGIPPTVAIEQRTSRG
GRKSTVATMTEIHHFLRLLYVKLGTQYCPDCNVAVEPQNTDQIVARLLREHKGEHIGLLA
PLVTARKGYYTDLAKWAGSKGHSHLRVDGEFIPVAPWPRLDRYKEHTIELPIADVVVDPA
NEADLRAAVKSALENGQGVMSVVWPVNKLHEALDSDLQQQHFSVKRACPSCGTSFPEPDP
RLFSYNSKHGWCTGCYGTGLQLQGFDEEQTGEETAWNAWYEGEAKVCTQCNGERLNRVAR
AVRWRDKSIAELASLPVSDAHTFFTGLVARGREGEIARDILTEIRGRLNFMQEVGLNYLA
LDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNRILLDALARLEGNGN
TLVVVEHDDDTIRRASHIIDIGPGAGIRGGRVVAQGSAQDLIEAPESVTGRYLAKPLQHP
LQGRRPVEADTPMIEIKGARLHNLRSVDAKIPVGRLSVVTGVSGSGKSTLAREVLLDNLM
QAVSQGKAPGWAGCDSIKGWEAIDRVLEVDQTPIGKTPRSCPATYVGFWDDVRKQFADTR
EARMRGWTAARFSFNTGDGRCPICEGQGMRTIEMNFLPDVKVPCDACNGARFNNDTLSVQ
MRGKNAGELLAMEVDDAIGYFAAHPKIHRPLQLMQDVGLGYLTLGQPSPTLSGGEAQRIK
LVTELSKARLTDGLIKTGRASRIPHTLYVLDEPTVGLSMADVEKLIHVLHRLVEAGNTVV
VIEHNLDVIAEADWLLDLGPEGGTGGGKLVGEGSPEHVMTLSDYSHTGRVLKEFLAHQQQ
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaattcgcatcgttggcgcccgccagaacaatctcaagaacctggacctg
accatcgccaccggcgaactggtcgtcgtgaccggcgtgtcggggtccggcaaaagttcg
ctggcctttgacaccctgtacgccgaggggcagcgccgttacgtagaaaccttctcgccc
tatgcgcgccagttcctggaccgcatggacaagccgcaggtagaccgcatcgaaggcata
ttgcccgccatcgccatcgaccagaccaacccggtgcgcagctcgcgcagcacggtcggc
acgatgacggaactgaacgaccacctgaagcttctgttcgcgcgcggcgccaagctgtac
tgccgcggctgcggcaaggtagtgcggcgcgatacgccggattccatttaccactcgctg
gccgaacgcgccgctgttgccggcgacccgcggctggtggtgaccttccccatcgccgtg
ccttccaatttcaccgaagaagaagtgcgtggcttcctggagcagcagggctacacccgc
gtgcacgccgaggaaaacgccgccccgcgcgcggccgctcctgccaagggcgccaagaaa
gccaaggcggccaaaagcgccacggaatcgcgccgcattctccacgttatccaggaccgc
ttccgcttcgccggcaccgaacgcgaacgcgtcatggaagcgctggacaccgcgctgcgc
atgggcgccgggcatctggccgtgtacgtcatggacgccgaaggcggcaacgcgcatatc
tggaaatacagcgaccggctgcattgcgccgattgcgacatcgaatacacggatccgctg
cccagcagcttctcgttcaattcgccgctgggcgcgtgtgaagcctgccgcggcttcggc
cgcgtgatcggcatcgatttcggcctggtcatcccggacgagaacaagacattgctggaa
ggtgccatcaagccgtggacgacgccgtcgtacaaggagtgccaggacgagctgcagaaa
tacgcgcccaaggccggcgtcccgctgggcgtgccctggaagaaaatgagcgaagagcac
aaacggtgggtgctctacggcacgcccgactggaagggcggcaacgacgcctggaagcac
cagtggtacggcgtgcagcgcttcttcgactggctcgagaccaaggcctacaagatgcac
gtgcgcgtgctgctgtcgaaataccgcagctacacgccctgccccacctgcaatggcgcg
cggctaaagcccgacgcgctgctctggcgcctgggcaccaaagaagaagccgacaccgtg
ctgccgcccgatgacggccgctacaagcgcttcatgccggttggcgccaactggagccgc
gagcagctcgacggcctgggcggcctgtccatccatgacgtgatgctgctgcccatcgaa
cgggtgcgcctcttcttcgacacgctgtcgttctcgggcgcgctggacgccgccaccgac
ctgctcatgaccgaagtgcgcgcgcggctcaagttcctgtgcgacgtgggcctgggctac
ctgacgctggatcgccagagccgcacgctctccggcggcgaggtccaacgcatcaacctg
accacggcgctgggcacctcgctggtgaacacgctgttcgtgctggacgagccgtccatc
ggtctgcacccgcgcgacatgcaccgcgtcgtcgaagtcatgcaccgcctgcgcaatgcc
ggcaacacgctcgtggtggtggaacacgatccgcaggtcatggtggccgcggaccgcatc
atcgacatcggccccggccccggcgaacgcggcggccagatcgtcttcgatggcacgcca
gccaagctgcgcaccgcgcgcacactgacgggcgattacctgggcggccgccagcgcgtg
gaagcgccgcgtcccatgccggtggcggcgaacacgccgcgcctgctcctggaaggcgtc
agcgcgcacaatctcaagaacgtttccgtcgaactgccgctgggccgcctggtctgcgtg
actggcgtgtccggctccggcaagtccaccttggtgcaggacgtgctgtaccccgccctg
ctcaagcagaagggcaaaccatccgaagcgccgggcgccttcgaacgtctgctgggcgcc
gaacagatcgccgacgtggtcatggtggaccagacccccatcggcaagaccgcccgttcc
aatccggccagctatgtcggcgcgttcgacgccatccgcaagctgttcgcccaggcgccg
ctggcgcgcgagcgcgcctacacggcgggcacgttcagcttcaacggcggcgatggccgc
tgccccacttgcggcggcaccggcttcgaacacgtggaaatgcagttcctgtcggacgtc
tacctgcgctgcccggactgcgatggcaagcgcttccgcccggaagtgctggaggtgcgc
gtcgagcacctgggcaagagcgcgtccatcgacgaagtgctggagatgaccgtcagcgag
gcgctggacttcttcaagggcctgcgcgatgtgcagaccgggctggcgcccctggccgac
gtgggcctggaatatgtgcggctgggccaacccgtgccgacgctgtcgggcggcgaagcg
cagcgcctgaaactggccggccacctggccgaggcggcgcgcagcggcatttcgaccgcc
aaggtcgccaagaaaggcagcctgttcctgttcgacgaacccaccaccggcctgcacttc
gacgacgtggcccggctgatgcgcgcgttccgcaaactgctggccgccggccacacgctg
ctggtcatcgaacacaacctggacgtgatccgcgcggccgactggctgatcgacctgggg
ccggaaggcggtgacgccggcggcatggtcatcggcaccggcacgccgcaggacctgatg
gacaatcccaagtcgcataccggcgcagccctgcgcgactacgatgtcagcatcctgccg
gccgacgtggtcgtaagcaccgacgccgatgcgcaagaggtcgaacaggcgggactgacc
gcgcgcatcgccgaaccgggcgaaacctatgccgcggacgtgggcaagccgctgcaatcc
atcatgcgtgagcgccgccaggccaatatggcgatcgaaatccgcaacgcgcgcgagcac
aacctgaagaacgtcagcgtggaaatcccgcgcgacaagttcacggtcattacgggcgtg
tccggctcgggcaagtccacgctggccttcgacatcctgttcaacgaagggcaacgccgc
tatctggaatcgctcaacgcctacgcgcgcgccatcgtgcagccggccggcaagccggac
gtggacgccatcttcggcatcccgcccaccgtcgccatcgagcagcgcaccagccggggc
gggcgcaagtccaccgtggccacgatgacggaaatccaccacttcctgcgcctgctttac
gtcaagctgggcacccagtactgccccgactgcaacgtggcggtcgaaccccagaacacg
gaccagatcgtggcgcggctgctgcgcgaacacaagggcgagcacatcggcctgctggcg
ccgctggtcaccgcccgcaagggctattacacggatctggccaagtgggccggatccaag
ggccactcgcacctgcgcgtggacggcgaattcattcccgtcgctccttggccgcgcctg
gaccgctacaaggaacacacgatcgaattgcccatcgccgacgtggtggtggatcccgcc
aacgaggccgacctgcgggcggcggtcaagagcgcgctggaaaacggccagggcgtcatg
tccgtggtctggccggtgaacaagctgcacgaggcgctggatagcgatctgcagcaacag
cacttctcggtcaagcgcgcctgcccgtcctgcggcaccagcttccccgaacccgatccg
cgcctgttctcgtacaactccaagcatggctggtgcacgggctgctacggcacgggcttg
cagttgcaaggctttgacgaagaacagaccggcgaagaaaccgcctggaacgcgtggtac
gaaggcgaagccaaggtatgcacccagtgcaacggcgagcgcctgaaccgggtggcccgc
gccgtgcgctggcgtgacaagtccatcgccgaactcgcctcgctgccggtgtcggacgcg
cataccttcttcaccgggctggtggcgcgcggccgtgaaggcgagatcgcccgcgacatc
ctcacggaaatccgcggacgcctgaacttcatgcaagaggtggggttgaactacctggcg
ctggaccgggccgctcccacgctatccggcggcgaagcgcagcgcatccgcctggccgcc
caactgggctccaacctgcagggcgtctgctacgtgctggacgagccgaccatcggactg
cacccgcgcgacaaccgcatcctgctggacgcgttggcgcgcctggaaggcaacggcaac
acgctggtggtggtggagcatgacgacgacaccatccgccgcgcctcgcacatcatcgat
atcggtcccggcgcgggcatccgcggcggccgcgtggtcgcccagggcagcgcgcaggac
ctgatcgaagcgccggaatcggtaaccggccgctacctggccaagcccttgcagcatccg
ctgcaaggccgccgcccggtcgaagccgacacgcccatgatcgaaatcaagggcgcccgc
ctgcacaatctgcgcagcgtggacgcgaagattccggtaggtcgcctgagcgtggtgacc
ggtgtatcgggctcgggcaaatccaccctggcgcgcgaagtgctgctggacaacctgatg
caggccgtgtcgcaaggcaaggcgcctggctgggcaggctgcgacagcatcaagggctgg
gaagccatcgatcgcgtgctggaagtggaccagacccctatcggcaagacaccgcgctcc
tgcccggccacctacgtgggcttctgggacgacgtgcgcaagcagttcgccgatacgcgc
gaagcgcgcatgcgcggctggaccgcggcgcgcttctcgttcaataccggcgacggccgc
tgcccgatctgcgaaggccagggcatgcgcaccatcgagatgaacttcctgccggacgtg
aaggtgccttgcgatgcctgcaacggcgcgcgcttcaacaatgacacgctcagcgtgcag
atgcgcggcaagaacgcgggcgaactgctggccatggaagtggacgatgccatcggctac
ttcgcggcccatcccaagatccaccgaccgctgcagctgatgcaggacgtgggcctgggc
tacctcacgctgggacagccctcgcctaccctgtccggcggcgaagcccagcgcatcaag
ctggtgaccgagctgtccaaggctcgcctgaccgacggactgatcaagaccgggcgcgcc
tcgcgcatcccgcatacgctatacgtgctggacgagcccaccgtcggcctgtcgatggcc
gacgtggaaaagctgatccacgttctgcaccgcctggtggaagccggcaatacggtggtg
gtgatcgaacacaacctggatgtgatcgccgaagccgactggctcctggacttgggtccg
gaaggcggcacgggcggcggcaagctggtgggagaaggttctcccgaacacgtcatgacc
ctgagcgactattcccatacgggacgggtcctgaaggaattcctggcacatcagcagcag
taa
DBGET
integrated database retrieval system