Alistipes indistinctus: AI2BBH_17390
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Entry
AI2BBH_17390 CDS
T06978
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ait
Alistipes indistinctus
Pathway
ait03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AI2BBH_17390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ait03019
]
AI2BBH_17390
03400 DNA repair and recombination proteins [BR:
ait03400
]
AI2BBH_17390
Enzymes [BR:
ait01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AI2BBH_17390
Messenger RNA biogenesis [BR:
ait03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AI2BBH_17390
DNA repair and recombination proteins [BR:
ait03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AI2BBH_17390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_Crp_2
MarR
B_lactamase-like_C
Volactin
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
BCG54693
LinkDB
All DBs
Position
complement(2222202..2224133)
Genome browser
AA seq
643 aa
AA seq
DB search
MPHPPFTGDYAAILKKYWGHDTFRPLQLETIESVAAGRDTLVLMPTGGGKSVIYQVPALA
SEGVCVVITPLISLMKDQVDRLRSRRILAEAIHGGRGRQEIDRVLDNCIYGDVKFLYISP
ERVDSELFRMRFAKMKVSLIAVDEAHCISQWGYDFRPAYLQIARLRDLQPEAAILALTAS
ATPKVAADIMQHLRFREPNLKQMSFARANLSYVVRRTEDKREHLLRIVNNVPGSGIVYVR
TREKTETVAKFLQENGIEADSYHGGMGYLTRSLKQENWTGGKTRVIVATNAFGMGIDKAD
VRFVIHYDICDSLEAYYQEAGRAGRDGRPAYAVMLLSGDDPSRVANRLRLEFPPVDTIRT
IYEGLFNYLQVAIGEGKHRAFAFNIHEFAARMKLFPPTVVNALKILQQNGYLILTDETDN
PPRIRFIVQRDDLYRMRVTRRELDHILTVLLRQYTGLFSDFVPIDEQELAQLSGYTVNHI
HELLRQLWQLHVIRYIPGNRSPMLILSEERLPGADVRISPESYKRRQEVAQERIDAVFRY
AENETECRSLVIQNYFGEQTDLPCGRCDICRERRKHTEPQSSAARRDEIRRQIAERLAAG
PLDLKTLAGGIRYEIDALLGEVEAMTAEGKIIEEKSGKLRINR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccacatccgccatttacgggcgactacgccgcaatcctgaaaaaatactggggacac
gacacgttccgaccgttgcagctcgagacaatcgaatcggtcgccgcggggcgtgacacg
ctcgtgctgatgcccaccggcggcggcaagtcggtcatctaccaggtaccggcgcttgcg
tccgaaggagtatgcgtcgttatcacgccgctcatttcgctgatgaaagaccaggtcgac
cggttgcgcagccgcaggatcctggccgaggcgatccatggaggacgcgggaggcaggag
atcgaccgcgtcctcgacaactgcatttacggcgacgtgaagtttctctatatctccccc
gaacgggtcgacagcgaactgtttcggatgcgcttcgcgaagatgaaagtttcgctgatt
gccgtggacgaggcgcactgcatttcgcagtgggggtacgacttccggcccgcctacctg
caaatcgcgcggctgcgcgacctgcagcccgaagcggcgatcctcgcgctgactgcttcg
gcgacgcctaaagtggcggccgacatcatgcaacacctgcgctttcgcgagccgaacctc
aaacagatgagctttgcgcgggcgaacctctcctacgtggtacgccgcaccgaagacaag
cgcgaacacctgctgcgtatcgtgaacaacgtaccgggtagcgggatcgtttatgtccgc
acgcgggaaaagaccgagaccgtcgccaaattcctgcaggaaaacgggatcgaagccgac
agctaccacggtggcatgggttacctgacccgcagcctcaaacaggagaactggaccggc
ggcaagacgcgggtgatcgttgcgaccaatgcattcggcatgggcatcgacaaagcggac
gtacgcttcgtgattcattacgacatctgcgactcgctcgaagcctattaccaggaggcc
gggcgcgccggacgcgatggacgcccggcctatgccgttatgctgctgtcgggcgacgat
ccgtcacgcgtggccaaccggctgaggctcgaattcccacccgtcgacacgatccgcacc
atttacgaagggctgttcaactatctgcaggtggccatcggcgaaggcaaacaccgcgct
ttcgcattcaacatccacgaattcgcggcacggatgaaactcttcccccccaccgtagtc
aacgcgctgaaaatcctgcagcaaaacggttacctgatccttaccgacgagaccgacaac
ccgccgcgcatccggtttatcgtgcagcgcgacgacctttaccgcatgcgggtcacgcgg
cgcgaactcgaccatatcctcaccgtgctgctgcgccagtacaccggtctgttcagcgac
ttcgtcccgatcgacgagcaggagctggcacagctctccggctacacggtaaaccacata
cacgaactgctcaggcaattgtggcaactgcacgtaatccgctacatccccggcaaccgc
agcccgatgctgatcctttccgaagagcggctgcccggagccgacgtgcgcatctcgccc
gaaagctacaaacgccgccaggaagtggcgcaggaacggatcgacgccgtattccgctat
gcagaaaatgagaccgagtgccgcagcctggtgatacaaaactacttcggagaacagacc
gacctcccctgcggacgctgcgacatttgccgcgaacgtcgcaaacacacggaaccgcaa
agcagtgcggcacgtcgcgacgaaatccgcaggcaaatcgccgaacggctcgcggccggc
ccgctcgacctgaaaacgctcgccggaggcatccgctacgaaatagacgcgttgctcggc
gaagtggaagccatgaccgccgaagggaaaataatcgaagagaaaagcggaaaactgcgg
ataaatcggtaa
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