Amycolatopsis japonica: AJAP_09830
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Entry
AJAP_09830 CDS
T03225
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
aja
Amycolatopsis japonica
Pathway
aja02024
Quorum sensing
aja03060
Protein export
aja03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AJAP_09830 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AJAP_09830 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AJAP_09830 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aja02044
]
AJAP_09830 (ffh)
Enzymes [BR:
aja01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AJAP_09830 (ffh)
Secretion system [BR:
aja02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AJAP_09830 (ffh)
Eukaryotic Sec-SRP protein
AJAP_09830 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
cobW
Zeta_toxin
APS_kinase
TctA
ArsA_ATPase
MMR_HSR1
AAA_31
NPHP3_N
AAA_18
AAA_30
AAA_16
NTPase_1
Thymidylate_kin
AAA_33
ParA
MobB
NACHT
6PF2K
TsaE
AAA
AAA_17
ABC_tran
hnRNP_Q_AcD
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AIG74864
UniProt:
A0A075UQR4
LinkDB
All DBs
Position
1990228..1991766
Genome browser
AA seq
512 aa
AA seq
DB search
MFDTLSDRLTSALQTLSRKGRLSDADIDATAREIRIALLEADVALSVVKDFIARIKERAK
GAEVHGALNPAQQVIKIVNEELVTILGGETRRLTFAKNPPTVIMLAGLQGAGKTTLAGKL
AMWLKKQGHAPMLVACDLQRPNAVTQLQVVGERAGVAVFAPEPGNGVGDPVDVARRAIDE
AKRAQHDIVLVDTAGRLGVDEELMKQAADIRDAVSPDETLFVVDAMIGQDAVTTAEAFRD
GVGFTGVVLTKLDGDARGGAALSVRQVTGQPILFASNGEKLEDFDLFHPDRMASRILGMG
DVLSLIEQAEQHFDQEKAEQTAAKLGSGQLTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKDQLAQVDDKQLDKLQAIIRGMTPAERADPKIINASRRVRISKGSGVAVRDVNDLVNRF
FEARKMMAQMAGRFGFGGGGGGSKNRKGKKGKKGKGRGPTQPKVRGGFPGGMPMLPPGGG
MPGGGMPDLSQLGGMNDVPGFDPKKFKLPKDK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctctccgatcggctcacgtccgccctgcagaccctgtctcgcaagggc
aggctctccgacgccgacatcgacgccaccgcgcgcgagatccggatcgcgctgctcgag
gcggatgtcgcgctgtctgtggtcaaggacttcatcgcccggatcaaggagcgcgccaag
ggcgccgaggtgcacggcgcgctgaacccggcgcagcaggtcatcaagatcgtcaacgag
gaactcgtcaccatcctcggcggcgagaccaggcggctcacgttcgcgaagaacccgccg
acggtcatcatgctcgcgggtctgcagggtgccggtaagacgacgctcgcgggcaagctc
gcgatgtggctgaagaaacagggccacgcgccgatgctggtcgcgtgtgacctccagcgt
cccaacgccgtcacgcagctgcaggtcgtcggcgagcgggccggggtcgcggtcttcgcg
cccgagcccggcaacggcgtcggcgacccggtcgacgtcgcccgccgcgccatcgacgag
gccaagcgcgcccagcacgacatcgtcctggtcgacaccgccggccgtctcggcgtcgac
gaagagctgatgaagcaggccgcggacatccgcgacgccgtttctccggacgagacgctg
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaccacggccgaagccttccgcgac
ggcgtcggcttcaccggcgtcgtgctcaccaagctcgacggtgacgcccgcggtggtgcc
gcgctgtcggtccgccaggtcaccggccagccgatcctgttcgcctccaacggcgagaag
ctcgaagacttcgacctcttccacccggaccggatggccagccggatcctcggcatgggt
gacgtgctcagcctcatcgagcaggccgagcagcacttcgaccaggagaaggccgagcag
accgcggccaagctcggcagcggccagctcaccctcgaagacttcctcgagcagatgctc
gcggtccgcaagatgggcccgatcggcaacctgctcggcatgctgcccggcgccggtcag
atgaaggaccagctcgcgcaggtcgacgacaagcagctcgacaagctgcaggcgatcatc
cgcgggatgacccccgccgagcgggccgacccgaagatcatcaacgcctcgcgtcgcgtg
cggatctcgaaggggtccggtgtcgccgtccgcgacgtcaacgacctggtcaaccggttc
ttcgaagcgcgcaagatgatggcgcagatggcgggccgcttcggcttcggcggcggaggc
ggcggcagcaagaaccgcaagggcaagaaggggaagaagggcaaggggcgcggcccgacg
cagcccaaggtccgcggcggctttcccggcggtatgccgatgctgcccccgggcggcggg
atgcccggtggcgggatgcccgacctttcgcagctcggcggcatgaacgacgtacccggg
ttcgacccgaagaagttcaagctgccgaaggacaagtag
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