Anneissia japonica (feather star): 117114036
Help
Entry
117114036 CDS
T08613
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117114036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117114036
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117114036
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117114036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
117114036
NCBI-ProteinID:
XP_033113462
LinkDB
All DBs
Position
Unknown
AA seq
2355 aa
AA seq
DB search
MNLDSLSLALSQISYLVANLNKKNYKSSVTEVSYLVQQHGLETDRHLLRCLFSHVDFSCG
DSKGSGKDFQAQLLIQECASLVSKSNFTTLLCFAVSNPLHYQKTLRPSPQLFSQISKTLK
LSRVQELVFGLALRHSSVPEIQILATQFVKLKLPDLIRSYVDPDLSQEVGGLTDISIEVL
HSLLSYLLQVGRDKSAAVTGVSPPQRDTFLATLRKEFPRDRLPVILAPLLYSSDEDITME
RLMSDNLNVPKGTTDSLLADALQELGYGCCQSMEECRKTLMQLGVQNLTPLSIAMVLGMM
ARTHTGLSDDSMSVQLLTGSNTWSDGKDKSDQSTSTTWNAELFIEAVRDLAPHINFRDVI
LALDHPGFILKDVQGLRLLKQALLRGLQDMFPIEVLYRIWKNTEGQLSWIQQILSNPDVF
CFADYPFHGVVVEILKALPEEDNREIANWKSMELTETLLTTSEMGKYDQVKALFAFPIKH
CPDMLLLSLLQCGVSSLPSVDTQPKWTSLRHELISILIPIFLGNHPNSSIVLQYAWLGNS
QSPSVRQIIMHSMAEWYMRGESDQARLSRILDVAQDLKALSLLLSGTPFKFVIDLACLAS
RREYLKLDKWITDKIREHGELFVQACVVFLKRRAPQVLGISEKDVGNYKQGSLPLETVGT
MLACLQAAAGTVAPDISEQIMNMVANCSNLLKSRPPPGVMKPQPSPGINQQPGFPSLGQA
FASQMDPLAGMQSLNLGGNTTPTSSVGMGTFPQQSMMSLFNASQSPPKPFPNLPPVLGGS
ALPNNNQHQMRTNSNMMPTPANKPARQGDIASIWPELNQTFSQEIDDEANSYFQKIYNQP
PNPSMSVEEVIEMLKNFKDSAVKKEREVFMCMLRNLFEEYKFFPQYPDRELHITACLFGG
IIEQALVTYIALGIALRYVLEALRKPHGSKMYYFGIAALDKFKTRLKDYPQYCQHLASIP
HFEQYPETLIEYIRYGEQQREPPSRSQTGTTTPSTPTVTTVTSTTTGSTKTTTTIATATT
TTAVTTKSTKHVPPSIANTTNINTLLVARKDEPKEPPENIQDKIAFIFNNLSQSNMTIKA
EDIKESVAEYKQWIAQYMVMKRASIEFNFHSLYSSFVDTLKMPDFSNMVINETLRNIEVL
LASDKSDSNFSDRSLLKNLGHWLGMLTLAKNKPILQINIDLKELLLEAYHNERSELELLY
VVPFVAKIIESCVKSKVFKPPNPWTMAVMGVLAELHQEPDLKLNLKFEVEVLCKHLSLDI
NEVPITGYLKEGERLLNFKPKLSGRRKHKDESSTLPPTVSDTPVAPTPSTAVAPATSGTT
PTTSSTIAQPQFNFQDLNTSSLSGLYAHITINSQAEVFQIVPQLRLCVRLAVERSVQELV
QPVVERSIKIALTTCEQIVKKDFALDPEENRIRLAAHHMVRNLTAGMAMITCREPLLLSI
SNNFKSVCLTTLKAATPQQKEAIEQAASMVAADNVELACAFIQKCAVEKAVPEMDRRLAT
EIELRKHARNEGRRYCDPVVLTYQAERMPEQIRLKVGGVTPTQIAVYEEFARVIPGFLPT
TESAQPVQVTNKQSYALDEITQIYDKCATEIEQHIQHVSMIAPNNQHLHVMELLLEAVVL
ARNSREIVTALSLLQKAVEGLMEGYIPLSLDPEIAMRYQNTHLLVLKALQDQRAYGPQWT
NKQVTRMVCEHRGEQKYNLDAIEALLRAHLITLQAYDLHIAQSMDNGMNPTSVTYAMNIA
KRFLIDDKQSNILNEADLYNTLQVLARIAAHSSNPPDMPGPFAGRLAHLIELVRQNHDPA
FLDKAPGGPTSMMHSGISQAREFDDPPGLQDKTEYLLREWVNMYHSPAGGRDSTKAFSAF
VNQMHQQGILKTDDLITRFFRICTELCVKLCYHALSEQAHTATLTRSKCFHTLDAFVRLI
ALLVKHSGDAANSVTKINLLNKVLGIVAGVLLHDHEKRGSDFQQLPYHRIFIMLLLELNA
PEHVLETINFQVMTAFCNAFHVLRPSKAPGFVYSWLELISHRIFIARMLATMPQQKQGWP
MYAQLLIDIFKFVTPFLRNADLSKHVSLLYKGTLRLLLVLLHDFPEFLCDYHYGFCDVIP
PNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLSDITQPPRILTNFAAMIQPVTFKKELD
SYIKTRSPVTFLSELRGHLQVSHEPGQRYNVPLMNALVLYVGSQAIAYIHSKGSTPSMNT
ITHSSHMDIFQNLAVDLDTEGRYLFLNAVANQLRYPNSHTHYFSCTLLYLFAEANSEAIQ
EQITRVLLERLIVNRPHPWGLLITFIELIRNPSFKFWGHDFVHCAPEIEKLFDTVARSCM
QQKQASTTNQANSPS
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggactcactgtcgctggccttatcccagatctcgtatttggttgcaaacctg
aacaaaaagaactacaaatccagtgttacagaagtctcttatttggtgcagcagcacggt
ctggaaactgaccgtcacctgctgcgctgtctcttctcccacgtcgatttcagttgcggt
gacagcaaaggcagtggtaaagattttcaggcccagctgttgatacaagagtgcgcatca
cttgtgtcaaagtcaaatttcacaacattactttgttttgcggtgagcaaccctctgcat
taccaaaagactctgaggccaagtcctcagcttttttctcagatcagtaaaactctcaag
ctatctcgagtgcaggagctagtgtttggcttagctctacgtcattcttctgttccagaa
atacaaattctagccacacagtttgtgaagctgaagctgccagatttaattcgctcctac
gtggaccctgatttaagccaggaagtaggaggtttgaccgatatttctattgaggttctg
cactcgttgctgtcatatctactacaggttggcagagacaaaagcgctgctgttacaggt
gtatcaccaccacagagagacacattccttgctacattacgcaaagagttcccacgtgac
cgtctgccggttattttagcaccactgttgtacagtagtgacgaagacatcaccatggaa
agactaatgtcagataacttgaatgtacccaaaggcactactgatagccttctagcggac
gcactgcaagaattgggctacggatgctgccaatcaatggaagagtgtcgcaagacgctg
atgcagctaggtgtccagaacctaacacctttgtcaattgcaatggtgcttggcatgatg
gctcgtacccatacagggctcagtgatgatagcatgagtgtgcagttgttgacaggctcg
aatacttggagtgatggtaaagacaagagtgatcaatccacctcaacgacatggaatgct
gaattgttcattgaagcggtacgtgacctggcgccacatattaatttccgcgatgtgatc
ctagcgctcgaccacccaggatttatcttgaaggatgtgcaaggcttgcgcttgctgaaa
caagcgttgctacgtggactgcaggacatgttcccgattgaggtgctctaccgtatctgg
aagaacaccgaaggacagttgtcatggatacaacagattttatccaatccggacgtgttc
tgctttgctgattatccattccatggggttgttgtggaaatattgaaggctcttccagag
gaggacaaccgagaaattgctaattggaaatcaatggagttgacagaaactctgttgaca
acatcagagatgggaaaatacgaccaggtgaaggcgctctttgcatttccaataaaacat
tgtcctgatatgctgctcttgagtctgctgcaatgtggcgtaagttctcttccgtcagta
gacacacagccaaaatggacgtcactacgacatgaactcatctcgatattaatcccaatc
tttttgggaaatcatcccaactcaagtatagtgctgcaatatgcctggttaggcaatagc
caatcaccctctgtgcgacaaattatcatgcattcaatggccgaatggtacatgcgaggt
gagagtgatcaagctaggctgtcgcgcatactagacgtagcccaggacctgaaggcttta
tcccttctacttagtggtacaccatttaaatttgtgattgatcttgcctgcctagcctcc
agacgggagtacctgaagctggataaatggataaccgacaagatacgagaacatggggaa
ttgtttgtgcaagcttgcgttgttttcctgaaacgtcgtgcaccccaggtgctaggaata
tccgagaaggatgtaggtaactacaagcaaggaagtctacctttggagactgtcggtaca
atgctagcatgcctgcaagctgcagcaggcactgtagcccctgatatttctgagcaaatc
atgaacatggtagccaactgctcaaacctgttgaagtctaggcctccacctggtgtcatg
aagccgcaacctagccccggtatcaaccaacagcctggctttcctagcttaggacaagct
tttgcgtctcagatggacccacttgctggaatgcaatctttgaaccttggtggcaataca
acacctacatccagtgttggtatgggtactttcccacagcagtcgatgatgtcattgttc
aacgcttctcagtcaccaccgaagccattccccaacttgcctcctgtgttgggcggatct
gctcttccgaataataaccaacatcagatgcggacaaatagtaatatgatgccaacacct
gccaacaagcctgctaggcaaggtgatatagccagcatatggccggaattaaaccagaca
ttctcccaagaaattgacgacgaagccaatagttacttccagaagatttacaaccagccg
ccgaacccgtcaatgtcagtagaggaagtgattgagatgctgaagaacttcaaagactct
gcagtcaagaaagaaagggaggtgttcatgtgtatgttgcgtaatctgtttgaggagtac
aagttctttccgcagtatcctgatcgtgagcttcatatcacagcttgtttgtttggtgga
atcatagaacaagctcttgtaacatatattgcacttggaattgctcttcgctatgtttta
gaagcactacgtaagccccatggtagtaaaatgtactatttcggtatcgctgcattggac
aagtttaaaacgagattgaaagactatcctcaatattgccagcatctggcatctatccct
cactttgaacagtacccagaaacactcattgagtacatccggtacggagaacaacagcgt
gaaccgccatctagaagccagactggcacaacaacgccctcaacgccgacagttaccaca
gttacatcaactactacaggcagtacaaaaacgacgacaacaattgctacggcaacaaca
acaacagctgtgacaacaaaatccaccaagcatgttcctccttcaattgcaaacacgacg
aacatcaatactctactcgttgctcggaaggatgaacccaaagaaccgcctgaaaacata
caggacaagattgcgttcatctttaacaacttatcacagtcaaacatgacaatcaaggca
gaggatattaaagagagtgtggcagagtacaagcagtggattgcacagtacatggtcatg
aagcgggcaagcatcgagtttaactttcactccctctactcatcatttgtcgacactctt
aaaatgccagatttctcgaacatggttattaatgaaacacttcgcaacattgaagtatta
cttgcatctgataagagtgattctaatttctctgatcgatcgcttctgaagaatctcggt
cattggctaggcatgctgacgctagctaagaacaaaccaatcctacaaataaacatcgac
ctcaaggagctgcttctggaggcttatcataatgaacgctctgagctggaactgttgtac
gttgtcccgtttgtcgccaagatcatagaatcgtgcgtgaaaagtaaagtgttcaagcca
ccgaacccgtggacgatggcggttatgggtgtcctggccgagctacatcaggagccggac
cttaagctcaacctcaagttcgaagtggaggtgttatgtaaacacttgagccttgatatc
aatgaagttcccattacagggtacctaaaggaaggtgagcgtcttctcaacttcaaacct
aaactttccggtcgccgcaagcacaaagacgaatcatcgacgttgcccccgacagtgtct
gacacgccggttgcaccgacgccaagcacggccgttgcaccggccacatcagggacaacc
cctactacttcatcgacgattgcacaaccacaattcaactttcaggacttgaatacatca
tcattgagcgggctttatgcacatattactatcaacagccaggctgaagttttccaaatt
gttcctcaactacgtttatgtgtgcggttggcagtggagcgatcggtgcaagaattagtt
cagcctgttgtagagaggtccatcaagatagcacttaccacttgtgaacaaattgtgaaa
aaggattttgcattagatccggaagagaatcgtatccgactggcagctcatcacatggtg
cggaacttgacagctggtatggcaatgataacgtgcagggaaccactactgcttagtatc
agtaacaacttcaagagtgtctgcttgacaacacttaaggctgcaacccctcaacagaaa
gaagcaatagaacaggcagccagtatggttgctgctgataatgtagaactggcgtgtgct
tttatccagaagtgtgcagtcgagaaagccgtacctgaaatggaccgtagattagcaact
gagattgaacttagaaagcatgcaaggaatgaaggacgtcgctattgtgatccagtcgtc
ctaacctatcaagctgaaaggatgccagagcagattaggctaaaggttggaggcgtaaca
cccacgcagattgcagtatatgaggagtttgctcgtgttatcccagggttcctgccaaca
acagaatcagcacagccagtccaggtaaccaataagcagtcttatgccctggatgagatc
acacaaatctacgataaatgtgcaacagagatcgagcagcacatccaacacgtgagtatg
atcgcaccaaacaaccaacacttacacgtcatggaattgctgttggaggccgttgtcctg
gcacgcaactcacgcgagatcgtcacggctctatctcttcttcaaaaggctgtagagggc
ttaatggaaggctacattccactaagtctagaccctgaaatcgccatgaggtaccagaat
actcacctgttagtcctgaaagccctccaagatcagagggcctatggaccacaatggacc
aataaacaagtcacaaggatggtctgtgagcatagaggagaacaaaagtataaccttgat
gcaattgaggcactgcttcgagcacacctcatcactctgcaagcatatgatttgcatatt
gcacagtctatggacaatggaatgaacccaacatcagtaacgtatgcaatgaacatcgct
aaacgatttctgattgacgataaacagagcaacatcttgaacgaagctgatttgtacaat
acattgcaagtgcttgcacgcatcgctgcacactcctcaaacccacctgacatgcctgga
ccatttgctgggaggttagcacacctcattgagctggtacgtcaaaaccatgaccctgcc
ttccttgacaaagcacctggaggaccaacatctatgatgcactctggtatctcgcaagca
cgggagtttgatgatccaccaggccttcaagacaagacggaatatctactccgcgagtgg
gttaacatgtaccattcacctgctggtggacgagatagcaccaaggcattctcggcattt
gttaaccagatgcatcaacagggtatcctaaagacagacgacctcataacccgcttcttc
cgaatctgtactgaactgtgcgtgaagctgtgctatcacgcgctgtcagagcaggcgcac
acagccacgttaacacgttccaagtgtttccacacattggatgcttttgttagactgatc
gcactgctggtgaagcattccggcgatgcggctaatagtgtgacaaaaatcaacttattg
aacaaagtactgggtattgttgccggtgtactgcttcatgaccatgagaaacgtggcagt
gacttccagcagttaccataccatcgtatcttcatcatgctactcctggaacttaacgcc
cctgagcacgtactcgagacaatcaacttccaagtaatgacagcattctgcaatgcattc
catgtgctgcgtccatctaaggcacctggttttgtatattcctggttggagttgatttcc
cataggatcttcattgctagaatgttagcaactatgccacagcagaagcaaggatggcca
atgtatgctcagttgttgattgatatcttcaagttcgttactccattcctccgcaatgct
gatctttcaaagcatgtatctctcttgtataagggaactcttcgactgttgttagttttg
ctgcatgacttcccagaattcctgtgtgactatcactatggtttctgcgacgtcatcccg
ccgaactgtattcaaatgcgcaacctgatcctgagtgcgttcccacgtaacatgcgtcta
ccggacccattcacgcctaacctcaaggttgacatgttgtcggatatcacgcaacctcct
cgaatccttacaaacttcgctgcaatgattcagcccgtgacatttaagaaggagctagat
tcttatattaagacgagaagccctgtcactttcctgtccgagctgcgaggtcatctgcaa
gtatcacatgagccaggtcagaggtacaacgtaccccttatgaatgcactagtcctatat
gtagggtcacaggcaatagcgtacatccacagcaaaggaagcacgccctctatgaacact
ataactcattcgtcgcatatggatatcttccagaatttagcagtcgacttagatactgaa
ggtcggtacctatttttaaatgcggtggcaaaccagcttcgctatccaaatagtcacaca
cattacttcagttgtacgttactctacctgttcgcagaagccaactcagaagccatacaa
gaacaaatcaccagggtgctgttagaacgtctgatagtgaatcgaccccacccctgggga
ttacttatcacatttattgaattaattcgcaatccaagcttcaagttctggggtcacgac
tttgtgcactgtgcaccagagattgaaaagttgtttgatactgtagcacgtagctgcatg
caacagaagcaagcaagtacaacaaatcaggccaactcaccttcatag
DBGET
integrated database retrieval system
