KEGG   Histoplasma mississippiense: HCAG_06861
Entry
HCAG_06861        CDS       T02229                                 
Name
(RefSeq) activator 1 37 kDa subunit
  KO
K10755  replication factor C subunit 2/4
Organism
aje  Histoplasma mississippiense
Pathway
aje03030  DNA replication
aje03410  Base excision repair
aje03420  Nucleotide excision repair
aje03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HCAG_06861
   03410 Base excision repair
    HCAG_06861
   03420 Nucleotide excision repair
    HCAG_06861
   03430 Mismatch repair
    HCAG_06861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aje03032]
    HCAG_06861
   03036 Chromosome and associated proteins [BR:aje03036]
    HCAG_06861
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_06861
DNA replication proteins [BR:aje03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    HCAG_06861
  DNA Replication Termination Factors
   ELG1-RFC complex
    HCAG_06861
Chromosome and associated proteins [BR:aje03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    HCAG_06861
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     HCAG_06861
  Check point factors
   HRAD17(Rad24)-RFC complex
    HCAG_06861
SSDB
Motif
Pfam: Rep_fac_C AAA AAA_lid_RFC1 DNA_pol3_delta2 RCF1-5-like_lid AAA_14 nSTAND3 RuvB_N Viral_helicase1 AAA_22 AAA_16 DNAX_ATPase_lid AAA_3 nSTAND_NTPase5 Rad17 AAA_assoc_2 Mg_chelatase AAA_11 MeaB Gp44_lid AAA_19 KTI12 NTPase_1 NB-ARC nSTAND6
Other DBs
NCBI-GeneID: 5445153
NCBI-ProteinID: XP_001539256
LinkDB
AA seq 354 aa
MDKPESSSAQAKRGLQENLAGAPADYELPWVEKYRPVFLDDIVGNTETIERLKIIARNGN
MPHVIISGMPGIGKTTSILCLARQMLGNSYKEAVLELNASDERGIDVVRNRIKGFAQKKV
TLPQGRHKLVILDEADSMTSGAQQALRRTMEIYSTTTRFAFACNQSNKIIEPLQSRCAIL
RYARLTDGQILKRLTQICEAEKVKYSEDGLEALIFSAEGDMRQAINNLQSTWAGFGFVSG
ENVFRVVDSPHPVKVQAMIKACWEGKIDAALDSLNELWDLGYSSHDIISTMFRVTKTMPT
LSEHTRLEFIKEIGFTHMRILEGVQTLVQLSGCLAKLCRINMKPESFQLPSLKR
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggataagccagagtcatcttcagctcaggccaaaagaggcctgcaagagaatctcgcg
ggggctcccgcagactacgagttaccttgggtagagaagtaccggcctgtattcctcgat
gacatcgtcggaaacacagagaccattgagcggctgaaaatcattgcgcgcaatggcaac
atgccgcatgttatcatctccggcatgccggggatcgggaagacgacttcgatcctgtgt
ctagcgcgacagatgctgggaaattcatataaggaggctgttttagaattgaatgctagt
gacgagagaggcatcgatgtggttagaaacagaataaaaggcttcgcgcagaaaaaagtc
acactcccacaagggcgacataagttggtgatcctcgacgaggcagacagcatgacatct
ggtgcgcagcaagccctccgacgaaccatggagatctactccacaacgacgcgcttcgcc
ttcgcctgcaaccaatcgaacaaaatcatcgaaccactgcaatcccgctgcgccatcctg
cgctacgcgcgcctgacggatgggcagatcctcaagcggctcacacagatctgcgaggcg
gagaaggtaaaatactccgaagacgggctggaagcattgatattcagcgcggagggcgat
atgaggcaggccatcaacaacctgcagagcacctgggctggattcgggttcgtgagcggc
gaaaacgtcttccgcgtcgtcgacagtccgcacccggtcaaagtgcaggcgatgatcaag
gcgtgctgggaggggaagatcgatgcggcgttggattcgttgaatgaattatgggatctc
ggctactcctctcacgacataatcagcacgatgttccgggtgacgaagacgatgccgacg
ctctctgaacataccagactcgaattcatcaaggagataggctttacacacatgcggata
ttggaaggggtgcagacgctcgtgcagctcagcgggtgtctggccaagctatgccggatc
aacatgaagccggagagcttccagcttccgtcgttgaagcggtga

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