Apostichopus japonicus (Japanese sea cucumber): 139965490
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Entry
139965490 CDS
T10891
Name
(RefSeq) terminal nucleotidyltransferase 4B-like isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139965490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139965490
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139965490
Enzymes [BR:
ajj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
139965490
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
139965490
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
139965490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
Motif
Other DBs
NCBI-GeneID:
139965490
NCBI-ProteinID:
XP_071824009
LinkDB
All DBs
Position
3:complement(22109146..22120199)
Genome browser
AA seq
224 aa
AA seq
DB search
MHPNWSSLSKLVTGSVVADTDLVTAYTLHVPPEPVNYGVLLIEFFELYGVNFNYFKTGIT
VENGGSYFPKEDASFMTDRCSLLCLKDPLNNGVDLGRNSFGFMEVRKAFHCAYQVLTQAV
VPHIDQESNGHSILGRIIRVTDEVMDHRLWVQQNWARKAMAMYPHKFSIHCNIPQPDAFC
LPDTALRIAQPIRPVNATTIILADSSQRNSQETGSCQEVNKKVQ
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaaattggtcaagcttatcaaaattggtgactggaagtgttgttgcagacaca
gacctggttactgcttacacattacatgttcccccagaaccagtcaattatggcgttctt
ttgattgaattctttgagctgtatggcgtcaacttcaactacttcaaaacaggaattact
gtcgaaaatggcggtagctactttcccaaagaggatgcctcttttatgaccgaccgctgt
agcctactctgtttaaaagatccactcaataatggagttgatcttggcaggaactctttt
gggttcatggaagtgaggaaagcattccattgtgcctaccaagtgctcacccaagctgtt
gtacctcacatagaccaagaaagtaatggtcatagcatcctcggtcgcattataagggta
acagacgaagtgatggaccataggttatgggtccagcaaaattgggcccggaaagcaatg
gctatgtatccacacaagttttccatacattgtaatatacctcaaccagatgccttctgt
ttaccggacacagccttgaggatagcacagccaatccgccctgtgaatgctacaaccatc
atccttgctgacagttctcagagaaatagccaagagacaggatcttgccaagaggtcaac
aaaaaagtgcaatga
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