Apostichopus japonicus (Japanese sea cucumber): 139974726
Help
Entry
139974726 CDS
T10891
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ajj04040
]
139974726
Ion channels [BR:
ajj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139974726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank
DUF2103
Ank_2
Kre9_KNH1_C
Motif
Other DBs
NCBI-GeneID:
139974726
NCBI-ProteinID:
XP_071838199
LinkDB
All DBs
Position
10:8411537..8429979
Genome browser
AA seq
934 aa
AA seq
DB search
MGRKMGRKLPWRRRAFREDHKGHKKIDLDKVGSSSSDSDGENGRHGDTLDEVETSMMENT
NIEAGDVNVSEEEDEEGADPFDGGSFHIGGLTIDDQPTVKTVKEAVVISDIERLSELLQD
GSPIGDGLLIAVSLRCPQIIQTICNFIGTKDPSESHNIINGFASGHEFLASTTALQLAAK
ENDFDTIKILIRHGAMLPDLKSCLHVPGVKGDKLLECFSFLQYVKAIVSPSLIILTETNP
VGRAFRLAVDLSRYSETGNLKRTLQSHPSFTKQIDEVIDTTEDLLCNLLDQCKSKREIEV
FLAISATPKCFQNAKRRQPKIKKHHNGGSALPVGLEQAISLTFKKFVAHPFSQMAVTERI
FHGPIAWDEMGPMRFLFLSLMVIMFTPFLCLSYSLCPVKKLVQFMETPYVRILNSFSSHL
LFLLFLLLTAVNVSYTNTECPDIGVDYPEGFTCSEVNTLYWPIYGRMYIILVITAGQVMW
TVASIYKMGAKSFFGKSWSWINLTQTCLYAASLAAYFVSLVQVDVYSSITDGGTEVVTVN
RKPANHTVYFSVNGTLYQPSRAEWSTFETQIWAEVTFSVANILTVQRLLHICIYFESVGS
LIISMGRMLSNVFKFAVVGALIVFSFALGFAQLMAPYSDLGSCEDDDFHVDHCGNAEMFE
SVQGSLHTLFWAIFGEFHIVDMSLPINLFMVHYTVQILHAIYIVVTSIILLNMLIAAMLT
TYESIQGNLHTEWIFSRTKLLQGYCGHRSNVPVPFNLVPSVRVIWGIVKKISRRIASLLM
RLGVTVPERFAARLNYHWKRKPAGGAAGNRDNNIRFKERQKILETLVERYKHGHLKVAPP
PRVDPITPTSRRSSVNASISNEPIDLKDQQRINKLTPQSLGSASSTPTSSTTHLKSTGTL
SSLEVIPEDERPAEVTPSNGNPGGRKHTSSVSLV
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcaagatgggccgcaagttgccttggaggcgacgggcatttcgcgaggatcac
aaaggccataaaaaaatcgacttagataaggttggaagctcctcgtctgactctgacggc
gagaatggacgacatggtgacacacttgacgaggtcgagacaagtatgatggaaaacaca
aacattgaggctggtgacgtcaacgtttccgaggaggaagatgaggagggtgccgaccca
tttgatggaggtagttttcacatcggcggactaacaatagatgaccaaccgactgtaaag
acagtcaaagaggcagtcgtgatatctgacattgaacggttgtcggaacttcttcaggat
ggttctccaatcggtgatgggcttctcattgctgtaagcctgagatgtcctcaaatcatc
caaactatttgtaatttcatcggaacaaaggatccatcagagagtcataacataatcaac
ggatttgcttctggacacgagttcctcgcatccaccacagcgctgcaactagcagccaag
gaaaatgacttcgacacgattaagattttgatccgacatggcgcgatgctaccggactta
aagtcatgtttacatgttccaggggtcaagggtgacaagctcctggaatgtttttcattt
cttcaatacgtaaaggcaattgtcagtccttcactgatcatcctgaccgagacgaacccg
gtgggtcgggcattccgactcgcagttgacttaagcagatacagcgagacaggaaacctt
aaacgaacactgcagagtcacccgagcttcaccaaacaaattgatgaagtaattgacaca
acagaagatttactgtgtaatttgctggaccaatgcaagagtaagagagaaattgaagta
tttctagcaatttcagcaactcccaaatgtttccaaaatgctaaaagacgacaaccgaaa
atcaagaaacaccataatggtggatccgccttaccagtaggtttggagcaggcaatatcg
cttacattcaaaaagtttgtagcgcatccgttttcccaaatggctgtaacagaacggatc
tttcatggtcctatagcctgggacgagatgggacctatgaggttcttattcctgtcctta
atggtgattatgttcacccccttcctttgcctttcatactctctctgtccagtcaagaag
ttggttcagtttatggaaacaccctacgtgcggatcctcaactcgttctcatcgcacttg
ttgttcctactcttcctgttacttacggctgtgaatgtttcatatacaaatacagagtgc
ccggacataggcgtggattatccagaaggcttcacttgctccgaggtgaacacgctctat
tggcccatctacgggaggatgtatatcattctagtaataaccgcaggacaagttatgtgg
accgtcgccagtatttataagatgggcgccaagtcattcttcggaaagtcatggagttgg
ataaatttgactcaaacgtgtctatacgctgcatcacttgcagcttacttcgtgtctttg
gtacaggtcgacgtatattcgtccataacggatggaggcactgaggttgttacagtgaat
cgaaagccggctaaccataccgtttattttagtgttaatggtacactgtaccaaccatca
cgggccgaatggagtacattcgaaacccaaatttgggctgaagttactttttctgtggcc
aatatcctgactgtacaaagactgttgcatatctgcatatacttcgagagtgttggctcg
ttaattatctcaatgggtcgtatgctatctaatgtgttcaagttcgccgtggtgggagct
ttaatcgtattttcttttgctctggggtttgcccagctcatggctccttactctgacttg
gggagctgtgaagatgacgatttccacgtggatcactgcggaaatgccgaaatgtttgaa
agcgttcaaggttctctacatacgcttttttgggcaatctttggagagtttcatatagta
gatatgtctttaccgatcaacctgttcatggttcactatactgtgcaaattcttcacgcc
atctacatcgttgtgacgtcgataatactgttaaatatgttgatagctgcaatgttgact
acgtacgaatcaatacaaggaaacttacatacagaatggatattttcaagaacgaagtta
ctgcagggatactgcggtcataggtcaaatgttccagttccttttaatcttgttccttcc
gttcgtgttatttggggaatcgtgaagaaaatttctcgaagaatcgcaagcttgctcatg
cgacttggagtgacggttccagaacgttttgcagctaggcttaactaccactggaaaagg
aaaccagccggtggagcagcgggcaacagggataataatatcaggttcaaggaacgccaa
aagattcttgaaactttggtcgagcgttacaaacacggtcacttgaaggtagctccacct
cctcgtgtggacccgataactccaaccagtcgaagatcctctgttaatgcctctatttca
aacgagccaattgatcttaaagatcagcaaaggattaacaaacttaccccgcaaagtctg
ggatcagcttcatctacacctacgtcatcaacgactcatctaaaatctaccggtaccctt
tcatctctggaagtcatcccagaagatgaacgaccagcggaagtcacaccgtccaacgga
aaccctggcggaaggaaacacacatcgtcggtcagtctggtttag
DBGET
integrated database retrieval system
