Apostichopus japonicus (Japanese sea cucumber): 139974883
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Entry
139974883 CDS
T10891
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139974883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139974883
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
139974883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Rad54_N
DEAD
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
139974883
NCBI-ProteinID:
XP_071838500
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All DBs
Position
2:4237647..4281499
Genome browser
AA seq
739 aa
AA seq
DB search
MLRCRAPSQLGNNQHKRKRICQENQQQNHAKKVKMLVTEEGSCHKKHAVSKAPLKDSNMA
ELSVISKSSHEEMIRKILAQPFKVPIPNYKGPSYRQRILGVRRTTGMRPLHDPTEEDALV
LFAPPEVSAEERLKQEKETQVHVVVDPVLAKKLRPHQREGVKFLWDCVTGRICEDCFGCI
MADDMGLGKTLQCITLMWTLLRQSPDGKPEIQTVIVVAPSSLVKNWYNEIHKWLGGRLDA
LAIDSGSKDEIDRNLNSFMSQQGRRVSQPILIISYETFRLHSYVLHKGPVGLVICDEGHR
LKNCENQTYQALNLLKTRRRVLLSGTPIQNDLLEYFSLVQFVNEGLLGSPQEFRKNFELP
IIKGRDADAGQKIRDRGSQKLQELVALVNKTLIRRTATLLTKYLPVKVEHVVLCKTSDIQ
TSLYRDIVKSKLSDLQQEQNKKKASSLSTILLLKKLCNYPGLIYKYCQKEGLLSYFPNGY
NMEKVQPELSGKLLVMEYILAITKATTTDKVVVVSNYTQMLDLVEKLCKQRGYCFVRLDG
SMSVKRRAIVVDRFNDPSSKDFIFLLSSKAGGCGLNLIGANRLIMFDPDWNPANDSQAMA
RVWRDGQKKPCFIYRLLATGTIDEKVFQRQAHKRALSSCVVDNEENVARHFSLNDLRDLF
QLKETTKSDTHDNLQCKRCVNNIQTRPPPDDANCNSDMMNWHHHTDKRGLTDQVLKATMN
SGVVSFVFHQKSHEQIKTV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgctacgatgcagagctcctagtcaactaggaaacaatcagcacaaaaggaagaggatc
tgccaggagaatcaacaacaaaatcatgctaagaaagtcaagatgttagttacggaggaa
gggagttgccacaagaaacatgcggtctcaaaggctccactgaaagactctaatatggcc
gagctctcagtgatatcaaaatcatcacatgaagaaatgataagaaaaattcttgcacag
cctttcaaagtacccattccgaattataaaggtccaagttacagacaaaggatattaggg
gtacggagaacaacaggaatgagaccacttcatgacccaacagaggaggatgccttggtc
ctttttgctcccccagaggtgtcagctgaagagaggttaaagcaagaaaaggaaacacaa
gtccatgtcgtcgttgaccctgttcttgccaagaagttgcgtccacatcagagagagggc
gtcaagtttttatgggactgcgtaactggacgtatttgtgaggactgctttggatgcatc
atggcagatgacatgggtctgggtaaaaccctgcagtgtataactttaatgtggacactt
cttcgacagagtcctgacggaaagcctgaaatacaaacagttattgtagttgctccttca
agccttgtgaaaaattggtacaatgaaatccacaaatggcttggtgggagactagatgct
cttgcaattgattctggatcgaaagatgaaattgacagaaacctgaattctttcatgagt
cagcaaggcagaagagtatcgcagccaattctcatcatctcatacgagactttccgtctt
cattcgtacgtcttgcataaaggaccggtcggactagtgatctgtgatgagggtcacaga
ttaaagaattgtgagaaccagacctaccaagccttgaacctcttaaagaccagacgacga
gtgcttctatcaggaacccccatccagaacgatttgttggagtattttagcctggtgcag
tttgtcaacgagggattacttggatctcctcaggagtttcggaaaaactttgaattaccg
attatcaaggggagagatgcagacgccggacagaagataagagacagaggaagtcagaaa
ctgcaggagctggtagctcttgtgaacaaaaccctaatcagaagaacagctacactgctc
acaaagtatttaccagtcaaagtcgaacatgtagtgctctgcaagaccagcgacatacaa
accagtctctatcgggatattgtgaaatcaaaactctcagatttacaacaagagcaaaac
aagaagaaagcatcatctctctcaacgatactgctcttaaagaaactgtgcaattatcct
ggacttatttataaatactgccagaaagaaggcttactgagctactttccaaatggttat
aatatggagaaagtccaacccgaactttcaggtaaactgcttgtgatggaatatatcttg
gccatcaccaaggcaacgaccactgataaagtagtggtggtctccaactacacacagatg
cttgaccttgtcgaaaagctctgcaaacagaggggttactgctttgttcgattagatggc
agtatgtccgtgaagaggagagccattgtggtggataggttcaacgatcccagtagtaaa
gacttcatctttctgttaagcagcaaagctggagggtgtggcttgaatctcataggcgca
aatcgactaatcatgtttgatcctgattggaatccggccaatgacagccaagctatggca
agagtttggcgagatggacagaagaaaccctgtttcatttatcggctcctggcaactggg
acgatcgatgagaaagtatttcaacggcaggcgcacaagagagcgctgtcaagctgtgtg
gtcgacaatgaagaaaacgttgccagacacttctcgctgaacgatttacgagatctcttc
caactcaaggaaaccacaaaaagtgacacccatgacaatcttcaatgcaagcgctgcgtt
aacaacatccaaacccgcccgcctcccgatgatgctaattgtaatagcgatatgatgaac
tggcaccaccacacagacaagagaggactcactgaccaagtactcaaggcaaccatgaac
tctggagtcgtcagttttgtattccatcaaaagtcccatgagcagataaaaactgtatga
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