Apostichopus japonicus (Japanese sea cucumber): 139976100
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Entry
139976100 CDS
T10891
Name
(RefSeq) ATP-dependent RNA helicase vasa-like isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Enzymes [BR:
ajj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139976100
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139976100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139976100
NCBI-ProteinID:
XP_071840644
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Position
2:complement(6439912..6461570)
Genome browser
AA seq
786 aa
AA seq
DB search
MSEDWDTQEEVSNGGFGASRFGGQSNGTTSGLSGGSSIGGGRGRGRGRGLGAFGSKLAGV
GGSNSTGDSGGFGRNRPSRNETNSGGDGWGDNNNSGGGFGSNRSKGFGSGGGGGFDSNRS
GGFGSYRRDNETNGDGGGGGGGRACFTCGSEDHQKRDCPQGGGGGGGGCFNCGSTDHQKR
DCPQGGGGGGGGGGCFTCGSTDHQKRDCPQGGGGGGGGGGACFNCGSTEHQKRDCPDGGG
GGGGGGGSGECFKCHEMGHFARECPNAERVDAENGDDRPAAADYVPPEPSQDEEVIFSTI
QKGINFDKYDDIPVEVSGNDPCRCINSFGEADLYDSIAENVRRAKYDKPTPVQKYGIPIV
SAGRDLMACAQTGSGKTAAFLLPILSGLLRDGLQSSALSGQQCPQCIVVSPTRELAIQIF
DEARKFSYKTMIKCVVIYGGTKVQHQTSMVDRGCNVLVATPGRLLHFINSGMISVEKVKY
LVLDEADRMLDMGFGPDMEKLVNNPAMPKKGERHTLMFSATFPNEVQERAAEYLDNYLFL
TVGRVGGANSDVRQVVVEVPQAAKKDKLIEILQSQPENDRTLVFTETKRGADFLASYLSQ
SGFPTTSIHGDREQREREEALNDFKRNRASVLVATSVASRGLDIPAVKHVVNFDLPSEID
DYVHRIGRTGRCGNTGLSTSFYNPEKDAAISRALIKILADAHQDVPEFLENVADSAIGTY
HGNTGGGFGGRDTRSGPRRGGGGGGNRGNRDWNSGGGGGGQESWNSGGGGGGGGGGGAAE
DEEAWD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggattgggacacacaggaagaagtatccaatggagggtttggagcctcaagg
tttggtggccaaagcaatggaacaacttcaggtttaagtggtggttcatcgattggaggt
gggagaggcaggggccgtggccgaggcttgggcgcctttggttcaaaattagctggagtc
ggaggatcaaactcaactggtgacagcgggggctttggcaggaatcgacccagtaggaat
gaaacgaacagcggaggagacggttggggcgataacaataattctggaggggggtttggc
tccaacagaagcaagggctttggttctggtggcggtggaggatttgatagtaacaggtct
ggtggattcggttcttacagaagagataatgagaccaatggtgatggcggtggtggtggt
ggtgggcgtgcttgcttcacttgtgggtcagaagatcaccagaagagggactgtccacag
ggtggaggtggtggtggaggcggttgcttcaactgcggatcaacagaccatcagaagagg
gactgtccccaaggtggaggaggtgggggtggtggaggtggttgcttcacttgtgggtca
acagaccatcagaagagggactgtccccagggtggaggagggggtggtggtggtggaggc
gcttgcttcaactgtgggtcaacagagcatcagaagagggactgtcctgatggaggaggc
ggaggtggtggtggaggcgggagtggtgagtgcttcaagtgccacgaaatgggacacttc
gctagagaatgcccaaatgcagaaagagtcgatgcggagaatggagatgaccgcccagca
gcggcagactatgttccgccagagccatctcaggatgaagaagtaatattttctacgata
cagaagggcattaactttgacaaatatgatgacattccagttgaagtcagtggtaacgac
ccttgtagatgcataaatagctttggggaggctgatctgtatgacagcatcgctgagaac
gtcaggagagcgaaatatgataaaccaacgccagtccaaaagtatggtatacctattgtc
agtgcaggcagagatcttatggcatgtgcacaaacagggtcagggaaaacggctgcattc
ctcttacccatcctatctggtttactaagggatggtctccagagtagtgccttgagtggg
cagcaatgccctcaatgcatcgtggtgtctccaaccagagaattggccattcagatattc
gacgaagctaggaagttttcctataaaaccatgatcaagtgtgtggtcatctacggtggt
accaaagtgcagcaccaaacatccatggtcgataggggttgcaacgtcctggtggcgact
cctgggcgtctcttgcatttcatcaacagcggcatgataagcgtcgagaaagtgaagtac
cttgtgctggacgaggctgaccgaatgctggacatgggctttggccccgatatggagaaa
ctagtcaacaatccagcaatgccgaaaaagggagagagacacacacttatgttttcagct
accttccctaacgaggtacaggagcgggccgccgagtacttggacaattacctgtttctt
accgtggggagggtagggggggccaactctgatgtcagacaggtggtggttgaagttcca
caagcagcaaagaaagacaagctgatagagatactacagtctcaaccagagaatgacagg
actttggtgttcacagaaacaaagcgtggagctgatttcttggcatcgtacctcagccaa
tcaggctttcctaccaccagcatccatggtgaccgtgaacagagggaaagagaggaagcc
ctgaatgattttaagcgtaaccgtgctagtgtcctagttgcaacttcagtagcgtcaaga
gggctcgacattccagctgtgaagcatgtggtgaactttgacctgcccagtgagattgat
gactacgtccatagaattggtagaactggtcgctgcggtaacactggtctttcaacaagc
ttctacaatccagagaaggatgcagccatctctcgtgctctgatcaaaatattagctgat
gcccatcaagacgtgccagagtttttggagaatgtggcagactctgccatcggtacctac
catggcaacactggaggaggatttggtggcagggatacacgcagtggtccaaggagaggt
ggtggtggtggaggtaacagaggcaatagagattggaactctggcggtggcgggggcggt
caagaaagttggaattcaggaggaggcggtggaggtggtggaggaggaggagcagctgaa
gatgaagaagcctgggactaa
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