Apostichopus japonicus (Japanese sea cucumber): 139978792
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Entry
139978792 CDS
T10891
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04120
Ubiquitin mediated proteolysis
ajj04137
Mitophagy - animal
ajj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139978792
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139978792
04137 Mitophagy - animal
139978792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139978792
Ubiquitin system [BR:
ajj04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
139978792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
139978792
NCBI-ProteinID:
XP_071845388
LinkDB
All DBs
Position
13:complement(10758575..10764001)
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AA seq
685 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKS
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtcaaaactctgactggcaagaccatcacccttgaggtagaaccaagt
gacaccatcgagaatgtcaaatccaaaatccaggacaaggaaggtattccaccagaccag
cagcgtctcatcttcgctggtaaacaactagaggacggaagaacattatccgactacaac
atccagaaagagtccactctccatcttgtccttcgtctccgtggtggtatgcagatcttc
gtcaaaactctgactggcaagaccatcacccttgaggtagaaccaagtgacaccatcgag
aatgtcaaatccaaaatccaggacaaggaaggtattcccccagaccagcagcgtctcatc
ttcgctggtaaacaactagaggacggaagaacattatctgactacaacatccagaaagag
tccactctccatcttgtccttcgtctccgtggtggtatgcagatctttgtcaaaactctg
actggcaagaccatcacccttgaggtagaaccaagtgacaccatcgagaatgtcaaatcc
aaaatccaggacaaggaaggtattcccccagaccagcagcgtctcatcttcgctggtaaa
caactagaggacggaagaacattatccgactacaacatccagaaagagtccactctccat
cttgtccttcgtctgcgtggtggtatgcagatctttgtcaaaactctgactggcaagacc
atcacccttgaggtagaaccaagtgacaccatcgagaatgtcaaatccaaaatccaggac
aaggaaggtattcccccagaccagcagcgtcttatctttgcaggaaagcagctcgaggat
ggaaggacattatccgactacaacatccagaaagagtccacactccatcttgtccttcgt
ctccgtggtggtatgcagatctttgtcaaaactctgactggcaagaccatcacccttgag
gtagaaccaagtgacaccatcgagaatgtcaaatccaaaatccaggacaaggaaggtatt
cccccagatcagcagcgtcttatctttgctggaaagcaactcgaggacggaagaacatta
tccgactacaacatccagaaagagtccactctccatcttgtccttcgtctccgtggtggt
atgcagatctttgtcaaaactctgactggcaagaccatcacccttgaggtagaaccaagt
gacaccatcgagaatgtcaaatccaaaatccaggacaaggaaggtattccaccagaccag
cagcgactcatctttgctggtaaacaactagaggacggaagaacattatccgactacaac
atccagaaagagtccactctccatcttgtccttcgtctccgtggtggtatgcagatcttt
gtcaaaactctgactggcaagaccatcaccctcgaagtagaaccaagtgacaccattgag
aatgtcaaatccaaaatccaggacaaggaaggtattcccccagaccagcagcgtcttatc
tttgctggaaagcagctcgaggacggaagaacgttatccgactacaacatccagaaagag
tccacactccatcttgtccttcgtctccgtggtggcatgcagatctttgtcaaaactctg
actggcaagaccatcacccttgaggtagaaccaagtgacaccatcgagaatgtcaaatcc
aaaatccaggacaaggaaggtattcccccagaccagcagcgtcttatctttgctggaaag
cagctcgaggatggaagaacgttatccgactacaacatccagaaagagtccacactccat
cttgtccttcgtctccgtggtggtatgcagatctttgtcaaaactctgactggcaagacc
atcacccttgaggtagaaccaagtgacaccatcgagaatgtcaaatccaaaatccaggac
aaggaaggtattcccccagaccagcagcgtcttatctttgctggaaagcagctcgaggac
ggaagaacgttatccgactacaacatccagaaagagtccacactccatcttgtccttcgt
ctccgtggtggattttaa
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