Artibeus jamaicensis (Jamaican fruit-eating bat): 119046396
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Entry
119046396 CDS
T07223
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119046396 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119046396 (CNOT1)
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119046396 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119046396 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
119046396
NCBI-ProteinID:
XP_036997342
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLGPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEASNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctccacgttgtcctatgccattgataatccgttgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagctcccagatctactgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gagcagatagacgcttttcttaagacactgcgcagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagagtgtcgcaatataatcatgcagttt
ggtgttcgggaggttacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccactacagagtatctctgctcctggcagtgggatc
tggagtgatgggaaagataaaagtgatggagcacaggcacatacgtggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaattttaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtctgggtatggaagtgttcccagtagacctaatatatagaccttggaaa
catgcagaaggccagctctcattcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctactgaggctt
gcagaggtggggcagtatgagcaagtcaaacagctcttcagcttcccgatcaaacactgt
ccggacatgcttgtattggccttactacaaatcaacacctcctggcacaccttacgccat
gaactcatctccactctgatgccaatattccttggaaatcatcctaactctgctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtacgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttatcgaccttgctgcacttgcttctcgtcgtgaatacctcaaacttgacaaatgg
ctcacagataaaattcgagagcatggagagccttttatccaagcatgcatgactttttta
aagagacggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcaacaatgttggcctgtttacaagcttgtgcgggg
agtgtttctcaggagttatcagaaaccatcctcaccatggtagccaattgcagtaacgtt
atgaataaggccaggcagccaccacctggagttatgccaaaaggtcgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttctacccca
aatcaaacaactgcattcagtggtattggaggactttcatcacaactgccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcccttggacttcctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggagcgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttacatggcactaggcctagccctgagatacgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcacttacaggagtatattgagtatggacagcaatctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caagctcaggcccaagttccagcaaaagcaccccttgctggtcaggttagcactatggta
accacctcaacaaccaccactgttgctaaaacggttactgtcaccaggcctaccggagtc
agctttaagaaagatgtgccaccttctattaatacaacaaatatagatacgttgcttgtg
gccacagaccaaactgaaagaattgtagagcccccagaaaatatccaggagaaaattgct
tttatcttcaacaatctctcacagtcgaatatgacacagaaggttgaagaactaaaggaa
actgtgaaggaagaattcatgccttgggtttcacagtacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacgctgaagaatcctgaa
tttaataagatggttttaaatgagacctacagaaacatcaaagtgttactgacctctgat
aaagctgcagccaatttctcagatcgttctttgctgaagaacttgggacattggctagga
atgattacactagctaaaaataagcccatcttacatactgacttggatgtaaaatctttg
ctgctagaggcctatgttaaaggacagcaggaattgctctacgtagtgccctttgttgcc
aaagtcttagagtctagtattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctgaaggataaagatcgcctaaagaacttagatgagcagctctctgctccaaag
aaagatgtcaagcagccagaagaactccctcccatcacaaccacaacaacttctacaaca
ccagctaccagtaccacctgtacggccacggttccaccacagccacagtacagctatcat
gacatcaatgtctattcccttgcaggccttggaccacacattactctaaacccaacaatt
cccttgtttcaggcccacccacagttgaagcagtgtgtacgccaagcaattgaacgggct
gtccaggagttggtccatcctgtggtagatcgatcaattaaaattgccatgactacttgc
gagcaaatagtgaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacttgcagggaacct
ttgctcatgagcatatccaccaacctgaaaaacagttttgcctcagctcttcgtactgct
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaggctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagaatttgcacgcaatgtgcct
ggcttcttgcctacaaatgatttaagtcaacccacaggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagctcaaatttatgataagtgcattacagaactagag
cagcacctacatgccatcccaccaacgttggccatgaaccctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaattctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgctacaagtggtgctgatgctgaccta
ctgctgcgttacagggaatgtcacctcttggtcttaaaagctcttcaagatggccgggca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggacgag
tataaatataatgtggaggcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcgatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggcagatctcttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttctttcgtctgtgtactgagatgtgtgtcgagatcagttaccgtgct
caggcagagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctac
cacaacctggatgccttcgtccgactcattgcactgctagtgaagcactcaggggaggcc
agcaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctgcaggatcacgatgttcggcaaagtgaatttcagcagcttccctaccatcgaatt
tttattatgctgctcttggaactcaatgcacctgagcatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacgttccacatcttgaggcctaccaaagctcctggc
tttgtgtatgcctggctcgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaaggggtggcctatgtatgcacagttactgattgatttattcaaa
tacttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgctggttcttctgcatgatttccctgagttcctttgtgattac
cattacggattctgtgatgtgatcccacctaattgtatccagctaagaaatctaatcctg
agtgccttcccaagaaacatgaggcttccagacccattcactcctaatctgaaggtggat
atgttgagtgaaataaacattgcaccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcggtcaccggtcacttttcta
tctgatctgcgcagcaacctgcaggtatccaatgagcctggcaatcgctacaacctgcag
ctcatcaatgcactggtgctctatgtcgggactcaggccattgcgcacatccacaacaag
ggcagcacaccttcaatgagcaccatcacccactccgctcacatggacatattccagaac
ctggctgtggacttggacactgaaggtcggtatctcttcttaaatgcaatagcaaaccag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctatacctttttgca
gaagcaaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtctgcttattaccttcattgagctgattaaaaatcca
gcatttaagttctggaaccatgagtttgtacactgtgccccagaaattgaaaagttgttc
cagtcggttgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggacg
ggtgccagttag
DBGET
integrated database retrieval system
