Artibeus jamaicensis (Jamaican fruit-eating bat): 119055600
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Entry
119055600 CDS
T07223
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119055600 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119055600 (SKIC3)
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119055600 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_17
TPR_8
TPR_14
TPR_11
TPR_12
TPR_CcmH_CycH
ARM_TT21_C
TPR_9
ANAPC3
ARM_TT21_2nd
Sel1
ARM_TT21_5th
TPR_15
TPR_30
TPR_5
Fis1_TPR_C
TPR_20
TPR_6
HAT_Syf1_M
BTAD
Vps39_1
DUF7017
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
119055600
NCBI-ProteinID:
XP_053519523
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MSSREVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCSQINAKDDLPRVYKKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHMEAARTWHKLIEMRQGEGADKPELHQLWRKLTQLLAESAQDENSETQQ
LLLTAFENALELSDKIPSEDHQVLYRHFIQCLSKFPHETAGLKKACEGMINIYPTVQYPL
EVLCLHLIESGNLTVEGQQYCCRLVEMDSKSGPGLIGLGIIALQEKKYEDAVRNLTEGLK
ESPQCTNGWCHLAEAQVRMHRPKDAVLSCNQALKKIDNLGASGGSLHQKNLCLRLKAEAL
VKLSDNESSEEAICTLDQVSDANEIPGLLVLKSLAYLNKGALDEASKVMEDVLSSYPDLA
EAHALEGFIHFTKKDYLQAEKCLQRALEKDAEVAEYHYQLGLIYWFMGEETRKDKTKALT
HFLKAAKLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAAIRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALIDYLDGKAVDYVEKALGYFTRALQHRADVSCLWKLV
GDACTSLYAVSPSKVNVQVLGVLLGQKEGEQVLKKNELLHLGGRCYGCALKLMSTSNTWC
DLGINYYRQVQHLVETGSNTNDLKELLEKSLQCLKKAVRLNSNNHLYWNALGVVSCHSGI
GNYALAQHCFIKSIQSEQVNAVAWTNLGVLYLANEKIEQAHEAFKMAQSLDPSYLMCWIG
QSLIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILQMN
AVPAAQVVLSKYVERIQNYAPAFTMLGYLNEHLQLKKEAADAYHRAILLLQNAEDQVTYN
DTIRNYGRLLCAIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPNTESLQALCALGLAMQDATL
SKAALNELLKHVKQKDDYPRCLLTSAIYALQGRGVAVQRQASKAVHSNPADPALWSLLSR
VVAQHAQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEDEKNIALKTIQK
AALLSPGDPAVWAGLMAACYADNKLALVNNTQPKRVDLYLALLSAVSASIKDKEFLGSYR
ESLEKWSLSQAVTGLADTGRIAEAEALCTTNLKSNPDQPDIILLLRQVQCKPLLESQKPL
PDAVLDELQKTVMSNSVSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLS
SLLRLALLALEVCVANISDDHWPSLVQEATTEALKLCFCPLAVLAQALLQFNRKMGARET
RRLLERLVYQPGYPKSIVSTARWYLLRHLYAKNDCELIDVLVNNAKTHGDSRALELNQKL
SSQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagggaagtgaagactgctctgaaaagtgctcgggatgcaatcaggaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggagttgcggcggccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattattagcttggcaggggtta
gcaagcctgtatgagaaatgtagtcagataaatgctaaggatgacttacctcgtgtttac
aaaaagctcctggacctttatgaaagtgtcgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgtattaccaagaaaagaaacacatggaggcggcccgaacatggcac
aagttgatcgagatgcgacaaggagaaggtgcagacaagcccgagcttcatcagctgtgg
aggaagttgacgcagctgctggccgagagtgcccaggatgagaacagtgagacccagcag
ctgcttttaactgctttcgagaatgcactggaattatcagataagattcctagtgaagat
caccaagtactttatagacatttcattcagtgcttatccaaatttcctcatgaaactgct
gggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtgcaatatccatta
gaagtgctttgtttgcatttaattgaatcaggaaatcttactgttgaaggtcagcagtat
tgttgcagactagtggaaatggattcaaaaagtggcccaggcctcattggtttaggcatt
atagcattacaagagaaaaagtatgaagatgctgttaggaacttaacagaaggattaaaa
gaaagccctcaatgcacaaatggatggtgtcatctggcagaggcccaagtcagaatgcac
agacctaaggacgcagttctttcatgtaatcaagctctgaagaagatagataatcttggt
gcatctggtggcagccttcatcagaagaatctttgtcttcgtttgaaagcagaggctttg
gttaaactctcagataatgaatcttcagaggaagcaatttgtactcttgatcaggtttct
gatgcaaatgaaatcccaggacttctggttctcaaaagtttggcctatctgaacaaaggc
gcattagatgaagcttcaaaggttatggaagatgttctgtcttcttaccctgacctagct
gaagctcatgctctggaaggttttattcattttaccaaaaaggactatctacaagcagaa
aaatgtttgcagagagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaatatattggttcatgggcgaagaaacaagaaaagataaaacaaaggctcttacc
cactttttaaaggctgccaaactggacacatacatgggcaaagttttctgctatttgggt
cattattacagagatgtagtaggagataaaaacagagcccgtgggtgctacaggaaagct
tttgaattagatgacaccgatgccgaatctggagctgcggctgtcgatttaagtgtggag
cttgaagagatggaaactgccttagctatcctaacaacagtaactcaaaaggcgagtgct
ggaactgcaaaatgggcctggctcagacgaggcctgtactatttgaaagctggtcagcat
tctcaagcagtagctgatttacaggcagcaataagggcagacccaaaggacttcaactgt
tgggaatccttaggagaagcctacttaagcagaggtggctatacaacagcattgaaatcc
ttcactaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatacaaagaggctatagctcaataccagctgatcattaaa
aagaaggaagattatgtgcctgctttgaaaggtctgggggagtgccatctcatgatggca
aaagcagctctaatcgattacctggatgggaaagctgtagactacgtagaaaaagcactg
ggatattttactcgggctctgcagcatcgagctgatgtgtcttgcctttggaagctggtc
ggggatgcctgtactagtctctatgctgtctcaccatctaaagtgaatgtgcaagtttta
ggagtccttctaggtcagaaagaaggagaacaagtattaaagaaaaatgagctcctccat
cttggaggaaggtgttatggatgtgcattaaaactgatgtctacatctaacacatggtgt
gatcttgggattaattattatcgccaggtacaacatctagtagaaacaggcagcaacaca
aacgaccttaaagaactgttggagaaatcattacagtgtctaaaaaaggcagtgagactc
aatagtaataatcacctatactggaatgctcttggtgtggtttcgtgtcacagtggtatt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccaatcagagcaagttaat
gctgttgcatggaccaacttgggagtattataccttgcaaatgaaaagattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttatttaatgtgctggattgga
caatctctaattgcagagacagttggaagttatgacaccatggatcttttcaggcacact
acggaactcagcatgcatactgagggagcgataggttatgcgtactgggtctgtacaaca
ctgcaagacaaaagcaacagagaaaccgagctgtaccagtacaacatccttcagatgaat
gctgtccccgcagcacaagttgttttgagtaaatatgtagaaagaattcagaattatgct
ccagctttcacaatgttgggctatttaaatgagcatcttcaactgaaaaaggaagcagca
gacgcctaccacagggcaattttgttgttacagaatgcagaagaccaagttacttataat
gatacaattagaaattatggcagattgttatgtgccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaagagctagaggacatcattggttttgcattggct
ttatttatgaagggtctgtataaagagagcagcaaagcctacgagagagccttgtctatt
gtcgaatcagagcaagacaaagcccatatcttgacagctctggcaataacggagtataaa
caaggaaaaatggacgtagccaagacactgctatttaaatgctctatcttaaaggagcca
aacacagagagccttcaagccctgtgcgctctaggattggcaatgcaggatgctaccctg
tcaaaagcagcacttaacgagttactgaagcacgtcaaacagaaagacgactatccgagg
tgccttcttacttcagcgatctatgcgctgcaaggccgcggcgtggccgtgcagagacaa
gcatctaaagctgttcacagcaaccccgccgatccggctctttggtctctgttgtcccga
gtggttgctcagcatgctcaacgaaatgcgaagggaggtgctgtagcaggaaatgtggct
catattctggactcaaatcatggaaagaaggcgttactgtacactgcagtaaaccagttg
gctatgggaagcagttcagcagaagatgaaaaaaatattgcactgaagaccattcagaag
gcagcgctcctttctccaggtgatcctgctgtctgggctggactaatggcagcctgttat
gctgataataaacttgctctggtgaacaacactcagccaaagagggtagatttatacttg
gcactattatctgctgtttctgcttcaattaaagacaaagaattccttggaagttaccgt
gaatcccttgaaaagtggtctctgtcccaagctgtcactggtctggcggacacaggaaga
atagccgaagctgaagccctttgcacaacgaacttaaaaagtaaccctgatcagccagac
attatcttacttttgagacaagttcagtgtaaaccactcctggaatcacagaagcctctt
ccggatgccgtactcgatgagctccagaaaacagtcatgtccaactcagtctctgttcca
gcctggcagtggttggcacacatatatcagtctcaaggaatgatgggtgctgccgagatg
tgttacaggaagagtctgcaagtcgcgtcccagcagggcagctggagtgggaagctctcg
agtctgctgaggctagcgctgcttgcgttagaagtctgtgtggccaacatttctgacgat
cactggccatccctggttcaggaagctacaaccgaagccttgaaactttgcttctgtcca
ctggccgtccttgcacaagccttgttacagttcaaccgcaaaatgggggcaagagagaca
cggcgacttttggagagactggtgtatcagcctggctatcccaagtctattgtatcaacc
gcacgttggtacctcctgaggcacttgtacgccaaaaatgactgtgagctcattgatgtg
ctggtaaacaatgccaaaacgcatggagattcaagagccttggaactgaatcagaaactg
tcctcacaataa
DBGET
integrated database retrieval system
