KEGG   Acinetobacter johnsonii: RZ95_04060
Entry
RZ95_04060        CDS       T04178                                 
Name
(GenBank) RNA polymerase sigma factor RpoD
  KO
K03086  RNA polymerase primary sigma factor
Organism
ajo  Acinetobacter johnsonii
Pathway
ajo02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ajo00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RZ95_04060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ajo03021]
    RZ95_04060
Transcription machinery [BR:ajo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RZ95_04060
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Cwf_Cwc_15
Other DBs
NCBI-ProteinID: ALV72153
UniProt: A0A0U3I9G2
LinkDB
Position
complement(824882..826765)
AA seq 627 aa
MSDMTSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APESDDAMFEGGNEAADEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVEVVLQEYKDYEAGERRLADILSGYLDPETDEAIPE
VLEEESEIDEEDSSTKSTKDVKLDDDEEEEESESDDDSEGESGPDPEIAKARFDELTAAW
KNTRTIIEKHGRSSKEAEDALESLATVFMMFKFTPRLFDIISEMIRGTHEQIRTSEREVM
RYAVRRGRMDRTQFRTSFPGQESNFAWLDEQIAKASPDQKGYLEKVRPDVLAFQQKIADI
EKDLGLDVKGIKEISKRMAVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQE
GNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRVS
RQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSN
ITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRERI
RQIEAKALRKLRHPSRSEHLRSFLEND
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgagcgatatgacttcccctacttcacaagtagcggctctgattagccgaggcaaagag
caaggttacctaacttacgctgaggttaacgatcatctcccagactcgatcactgaaagc
gaacagattgaagacattattcaaatgcttcaagacgtcggtattcctgtgcacgaacgt
gcgcctgaatctgatgatgcaatgtttgagggtggtaatgaagctgccgatgaagttgct
gaagaagaagccgctgctgttcttgcctctgtagaaaatgagcctggtcgtaccacagac
cctgtccgcatgtatatgcgtgaaatgggtactgttgaactgttgacgcgcgaaggcgaa
atcagtattgcaaaacgtattgaagaagggattcgtgacgttcttcactcgattgcttac
tggccaaatgcggttgaagtggtattacaagaatacaaagattatgaagcgggcgaacgt
cgtcttgcggacatcctttcaggttatttagaccctgaaactgatgaagcgattccagaa
gtccttgaagaagagtcagaaattgatgaagaagactcttcaaccaagtctaccaaagat
gtgaaattggatgacgacgaggaagaagaagagtctgaaagtgatgatgattctgaaggt
gaatctggcccagatcctgaaattgccaaagcgcgctttgacgaactgactgcggcttgg
aaaaacacccgaaccatcatcgagaaacatggtcgttcaagcaaagaagcagaagacgct
ttagagtcacttgcaactgtgtttatgatgttcaaatttacaccacgtttatttgacatc
atttcagaaatgattcgtggtacacatgaacaaatccgtacctctgaacgtgaagtaatg
cgctatgcagtacgtcgtggtcgtatggatcgtactcaattccgtacctctttcccaggc
caagagtccaactttgcttggttagatgaacaaattgcgaaagcttcgccagaccaaaaa
ggctatcttgaaaaagtacgccctgacgttttagcgttccaacaaaaaattgcagacatt
gaaaaagatttgggccttgatgttaaaggcatcaaagagatctcaaaacgtatggctgta
ggcgaagcgaaagcacgccgcgcgaaaaaagaaatggttgaagcaaacttacgtttggtc
atttcgattgcgaaaaaatacaccaaccgtggcttacaattcttggacttgatccaagaa
ggtaacattggtttgatgaaagcggtagataagtttgaataccgtcgtggttataagttc
tcgacttatgcaacgtggtggattcgtcaggccattactcgttcgattgccgaccaagca
cgtaccattcgtattccagtacacatgatcgaaaccattaataagatcaaccgtgtatca
cgccaacttctgcaagaaatgggacgtgaaccaacacctgaagaactcggtgaacgtttg
gaaatggacgaagtcaaagtgcgtaaagtgctgaaaatcgccaaagaaccaatttcgatg
gaaacaccgattggcgatgatgaagattcgcatttgggtgacttcattgaagacagcaac
atcacttcacctgtcgatgctgcaacatctgaaggcttaaaagaagcaactcgtgaagtg
cttgaaaacttgactgaacgtgaagcgaaagtcttgaaaatgcgttttggtatcgacatg
ccaacggaccatactttggaagaagtaggtaaacagtttgacgtgacgcgcgaacgtatt
cgtcagattgaagcgaaagcactacgtaaattacgtcacccttctcgttctgaacactta
cgttcattcctagaaaacgactaa

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