Acinetobacter johnsonii: RZ95_04060
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Entry
RZ95_04060 CDS
T04178
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ajo
Acinetobacter johnsonii
Pathway
ajo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ajo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RZ95_04060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajo03021
]
RZ95_04060
Transcription machinery [BR:
ajo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RZ95_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
ALV72153
UniProt:
A0A0U3I9G2
LinkDB
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Position
complement(824882..826765)
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AA seq
627 aa
AA seq
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MSDMTSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APESDDAMFEGGNEAADEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVEVVLQEYKDYEAGERRLADILSGYLDPETDEAIPE
VLEEESEIDEEDSSTKSTKDVKLDDDEEEEESESDDDSEGESGPDPEIAKARFDELTAAW
KNTRTIIEKHGRSSKEAEDALESLATVFMMFKFTPRLFDIISEMIRGTHEQIRTSEREVM
RYAVRRGRMDRTQFRTSFPGQESNFAWLDEQIAKASPDQKGYLEKVRPDVLAFQQKIADI
EKDLGLDVKGIKEISKRMAVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQE
GNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRVS
RQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSN
ITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRERI
RQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgacttcccctacttcacaagtagcggctctgattagccgaggcaaagag
caaggttacctaacttacgctgaggttaacgatcatctcccagactcgatcactgaaagc
gaacagattgaagacattattcaaatgcttcaagacgtcggtattcctgtgcacgaacgt
gcgcctgaatctgatgatgcaatgtttgagggtggtaatgaagctgccgatgaagttgct
gaagaagaagccgctgctgttcttgcctctgtagaaaatgagcctggtcgtaccacagac
cctgtccgcatgtatatgcgtgaaatgggtactgttgaactgttgacgcgcgaaggcgaa
atcagtattgcaaaacgtattgaagaagggattcgtgacgttcttcactcgattgcttac
tggccaaatgcggttgaagtggtattacaagaatacaaagattatgaagcgggcgaacgt
cgtcttgcggacatcctttcaggttatttagaccctgaaactgatgaagcgattccagaa
gtccttgaagaagagtcagaaattgatgaagaagactcttcaaccaagtctaccaaagat
gtgaaattggatgacgacgaggaagaagaagagtctgaaagtgatgatgattctgaaggt
gaatctggcccagatcctgaaattgccaaagcgcgctttgacgaactgactgcggcttgg
aaaaacacccgaaccatcatcgagaaacatggtcgttcaagcaaagaagcagaagacgct
ttagagtcacttgcaactgtgtttatgatgttcaaatttacaccacgtttatttgacatc
atttcagaaatgattcgtggtacacatgaacaaatccgtacctctgaacgtgaagtaatg
cgctatgcagtacgtcgtggtcgtatggatcgtactcaattccgtacctctttcccaggc
caagagtccaactttgcttggttagatgaacaaattgcgaaagcttcgccagaccaaaaa
ggctatcttgaaaaagtacgccctgacgttttagcgttccaacaaaaaattgcagacatt
gaaaaagatttgggccttgatgttaaaggcatcaaagagatctcaaaacgtatggctgta
ggcgaagcgaaagcacgccgcgcgaaaaaagaaatggttgaagcaaacttacgtttggtc
atttcgattgcgaaaaaatacaccaaccgtggcttacaattcttggacttgatccaagaa
ggtaacattggtttgatgaaagcggtagataagtttgaataccgtcgtggttataagttc
tcgacttatgcaacgtggtggattcgtcaggccattactcgttcgattgccgaccaagca
cgtaccattcgtattccagtacacatgatcgaaaccattaataagatcaaccgtgtatca
cgccaacttctgcaagaaatgggacgtgaaccaacacctgaagaactcggtgaacgtttg
gaaatggacgaagtcaaagtgcgtaaagtgctgaaaatcgccaaagaaccaatttcgatg
gaaacaccgattggcgatgatgaagattcgcatttgggtgacttcattgaagacagcaac
atcacttcacctgtcgatgctgcaacatctgaaggcttaaaagaagcaactcgtgaagtg
cttgaaaacttgactgaacgtgaagcgaaagtcttgaaaatgcgttttggtatcgacatg
ccaacggaccatactttggaagaagtaggtaaacagtttgacgtgacgcgcgaacgtatt
cgtcagattgaagcgaaagcactacgtaaattacgtcacccttctcgttctgaacactta
cgttcattcctagaaaacgactaa
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