Advenella kashmirensis: TKWG_02335
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Entry
TKWG_02335 CDS
T02117
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
aka
Advenella kashmirensis
Pathway
aka02020
Two-component system
aka02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aka00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TKWG_02335
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TKWG_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aka03021
]
TKWG_02335
Transcription machinery [BR:
aka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TKWG_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AFK61101
UniProt:
I3U7W3
LinkDB
All DBs
Position
406929..407633
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AA seq
234 aa
AA seq
DB search
MRHALELRTGQQLVLTPQLQQSLRLLQCSALDLQAELAQVLQDNPMLELVDNNQISEDST
NTSENDAELLQQDWASQPGQKSRDDEYFQPETAVGLSLSEHLREQLRLTHASERDVSLAE
YLIEELDDNGYLMSSLQEIVTLFSEEADVSEDDLAVALRLLQSCDPPGVGARTLSECLLL
QLNVSSLANPPDSDVLACARLICEHGLEALGRADMAQLRSVTGADIDKIRQAHA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatgcgttagaacttcgaaccggccagcagttggtgctgaccccgcaactgcaa
caatctttgcgcttgttgcagtgttctgcgctggatctccaggcagaactggcacaggtg
ttgcaggacaatcccatgcttgaacttgtcgataataaccaaatatcagaagatagtaca
aatacaagcgaaaatgatgccgagcttttacaacaggattgggcctcgcagccgggtcag
aaatcgcgcgatgacgaatattttcagcccgaaaccgctgtcgggctgtcgctttccgaa
catttgcgggaacagttgcggctgacccacgcttcagagcgggacgtgagcctggccgaa
tacctgatcgaggagctggacgataacgggtatctgatgtccagcctgcaggaaattgtc
acattgttctctgaggaggccgatgtcagcgaagatgatctggccgtcgccctgcgtctg
ctgcagtcatgtgatccgcccggcgtgggtgcgcgtacgctttccgaatgcctgctgctg
caattgaatgtctcgtctctggccaacccgcccgattccgatgtgctggcttgtgcccgt
cttatttgcgagcacgggctggaggcgttgggacgagccgatatggcgcaattgcggtcc
gtgactggcgccgatatcgacaaaatccggcaggcgcatgcctga
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