Acanthopagrus latus (yellowfin seabream): 119007675
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Entry
119007675 CDS
T08233
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119007675
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119007675
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
YtkA
Motif
Other DBs
NCBI-GeneID:
119007675
NCBI-ProteinID:
XP_036933427
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Position
18:20792346..20795006
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AA seq
821 aa
AA seq
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MTKTIGYRDWRWQALWWHHFFLLWSTINGQTRYSIPEELKQGSVVGNLAKDLGLGLTEIF
DRKLRVASEAGKQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVVENPLQSHRIE
VEIRDINDNSPHFLTQEINLKIPESVALGKRFPLESAEDPDVGSNSLKTYSLSKNEYFSL
KFKDAKNGKTVPELVLEKPLDREKNALHQLVLTALDGGNPVTSGTCKIMINVLDINDNFP
VFTDNEYKVSLKENSTKGTFVIKLTATDADEGLNGEVKYSFGSRTPDFVLSTFEINDRTG
ELKLKGPLDYETSKSFLIDITAKDKGTPEMDGNCRVQLDVEDINDNAPEIVLTSKPSPAR
EDAPSGTVVALISARDLDSGNNGKVTLQLSKRSPFTLKPSFSNNYELVTSGPLDRERFSE
YNVEITATDSGSPPLSSKKMIPVSITDVNDNPPIFSQPSYNVYLKENGVAGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPPLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEVKDDGEPVQSAT
VTVSILMEDGLHEPILDLRQKATEPSKKNGRITLYLILSLASVSVLSVLTFLILAVKCIR
SSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaataggataccgagactggaggtggcaggcgctctggtggcatcatttc
tttctcttgtggagtacaataaacggacagactcgttacagcatcccggaggagctgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactaacagagattttt
gaccgtaagctgcgtgtcgcctctgaggctggtaagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtgaatgacagaatagacagagaggctttatgcggacaaagcgcc
agctgtgtgttgcctctgcaagttgttgttgaaaatcccttgcaatctcatcgaattgag
gtggaaataagggacataaatgataattctcctcattttctgacacaggagattaacctg
aaaataccggaatcagttgcacttggcaaacgctttccgttggagagtgcagaggaccct
gatgttggaagcaattcgttgaaaacgtactctctgagcaaaaacgaatatttttctctc
aaatttaaagatgcaaaaaatggtaaaacggtcccagaattggtgttagagaagccttta
gacagagaaaagaatgctcttcatcagctggtgttaacagcattagatgggggaaacccg
gttacatctggcacctgtaagataatgattaatgtactcgatataaacgacaattttcca
gtattcactgacaacgagtacaaagtatctttaaaggagaacagcacaaaaggaacattt
gtaattaaacttacagctacagatgcggacgagggccttaatggtgaagtgaaatattct
ttcgggtcccgcactccagattttgtattatcaacatttgaaataaatgatcgtacaggc
gaactcaaattgaaaggaccattagattatgaaacgtctaaatcattccttattgatata
actgctaaagacaaaggcactcccgaaatggacggtaactgtcgtgtgcagttggacgta
gaagacataaatgataatgctccagaaattgtgctcacttcaaaacccagtccagcacgt
gaggacgcaccaagtggcacagtagtagctctgatcagtgcacgagaccttgactctggt
aataatggtaaagttactttacagctttctaagcgttctccgttcactctgaaaccatca
ttctctaataattacgagctggtcaccagtggacctttagaccgagagagattctccgaa
tataacgttgagattacagccactgattcaggctctcctcctctgtccagtaagaaaatg
atacctgtcagcatcactgatgtgaatgacaaccctcctatattctctcagccctcctat
aatgtctatttaaaggagaatggggtagcagggtctatactgtactcagtatcagcgtct
gacctggactttggtgaaaacgctaagatctcttactctatcctggactctaaagtgcag
gacgtgtctgtctcctcttatgtctacatcaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaagctgaaggtgtttcagattcaggttcaggcaaaggaccag
ggctctccgcctctcagcagcaacgccaccgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaggcgggtcacctggttaccaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggaggccacagacgcctctctgttc
actgtcaatctgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagaggtcaaggacgacggggaaccggtccagtccgccacc
gtcacggtgtccatcctgatggaggacggcctccacgagcccatcttagacctccgacag
aaagcgaccgagcccagcaagaaaaacggcagaatcactctttatttgattctgtctctg
gcctcggtgtccgtgctgtctgtgctgacttttctcatcttagcggttaaatgcatcagg
agcagcagaagcagcgggagttgctgcatgagacggagcgactgtgatgattacaagaac
cccaacagaaacctgcagattcagctcaacactgacggacctataaagtacgtggaagtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgcatgtctccgatgtca
gagtacagtgatttcactttgatcaaacccagcagcaccactgactttaaggaggtgatc
agtgtcctggatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagc
agatga
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