Acanthopagrus latus (yellowfin seabream): 119015547
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Entry
119015547 CDS
T08233
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119015547 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119015547 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119015547 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119015547 (col9a2)
Proteoglycans [BR:
alat00535
]
Extracellular matrix (ECM) proteoglycans
Others
119015547 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119015547
NCBI-ProteinID:
XP_036947530
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Position
3:complement(19211953..19234167)
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AA seq
691 aa
AA seq
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MAALSALLKTWVLLQTLCLALAQVRGPQGPQGQPGPPGPSGMPGSDGIDGEKGPPGPPGP
PGQKGEPGEPGPDGAPGENGIDGLIGAKGDRGPVGSPGPKGQPGPSGEPGAPGPGLPGLA
GTPGPIGFPGEIGPTGPKGVLGSPGPPGLPGPPGKPGPPGKFIGGEEGSAEFQCPLNCPA
GPKGPQGIQGVKGHKGRAGVLGDPGSIGKTGTKGEMGISGEQGIPGPPGPMGLRGYPGMM
GPKGEAGPRGYKGITGPVGIPGPPGEEGPQGPPGEAGDKGDKGSRGIQGPQGVVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQAGMPGPPGPQGAAGLPGSPGSKGGPGAKGEPGPRGHS
GQSGAPGPLGEPGVPGEAGMEGVPGPKGDRGQRGEAGPQGIVGKPGSKGERGPIGVPGAQ
GLSGTKGDKGFQGKVGSKGDIGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDTGHNGPT
GDPGKPGDPGPSGLPGPRGLNGERGVPGMPGIQGSPGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGSPGPQGPHGLPGARGIPGMIGGPGQIGNTGLKGKR
GPKGERGDPGKPHPGLPGPPGIPGPPGIDGVARDGRPGERGPEGAAGEAGYPGKAGPQGL
PGFCEAAMCLAASAYTSPRLQEAGTIKGPNV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggtgttactgcagaccttgtgcctggct
ctggctcaagtgaggggtccacaaggtcctcagggccagcccggcccaccaggcccctct
ggcatgcctggatcagacggcattgatggagaaaaaggacctcctgggccccctggtcca
ccaggacaaaagggagagccgggagagccaggtcctgatggagcaccgggagagaatggt
attgacggtctgattggagcaaagggtgatcgaggtcctgtcggaagccctggccctaag
ggtcagcctggaccgagtggtgaacctggagctcctggacccggccttccaggactggct
ggcactccgggaccaatcggtttcccaggtgaaattggaccaactggaccaaagggtgtc
ttagggtcacctggacctccaggacttcctggaccccctggcaaaccaggtcctccaggg
aagttcattggtggagaagaaggcagtgcagagttccagtgtcctcttaactgtccagca
gggccgaaaggcccccagggaatccagggagtcaagggacacaaaggacgtgctggtgtt
ctgggagaccctggtagcattggaaagacgggtaccaagggagaaatgggcatctccggg
gagcagggcatcccgggacctccgggtccgatgggtctgaggggctatccagggatgatg
ggtcctaaaggggaagcaggtcctcgtggttacaagggcatcaccggacctgtaggaatt
cctgggcctcctggtgaggaaggacctcagggaccacctggagaggcaggagacaaggga
gacaaaggcagccggggtatccagggtccacagggcgtggttggcaaaaagggagagaat
ggtctgccgggtattgatggaaaagatggcacacctggtattcctggaataaagggcggc
cctggccaggctgggatgcctggtcctcctggtcctcagggagcagcgggattgcctggc
agtccagggtcaaagggaggacctggagctaagggcgagcctggacctaggggtcactcg
ggccagtctggtgcacctggacctctgggtgagcctggtgtccctggtgaggctggtatg
gaaggagttccgggacctaagggtgacagaggccagcgtggagaagctgggccgcaggga
atagtcggcaagcctggatccaaaggagagagaggaccgatcggtgttcctggtgcccag
ggtctaagtggaaccaagggagacaagggcttccaaggaaaagttgggtcaaagggagac
attggtgaccccggcgtggagggattggctggtgagaaaggtgaaaagggtttgtctggt
gaacctggacccaaaggacagcaaggaattaggggtgacacaggacacaatggacccacg
ggagacccaggtaaacctggagaccccggaccatcagggctgcctggtcctagaggactt
aatggagagcgaggagttcctggtatgccaggcattcaaggatcgccgggacgtgacgca
tccgaccagcatattattgaagtggtattgaagatgttgcaggagaggctagcagcggtg
gcagtgagtgccaagagggctgtgcttggcggagctggtgtgatgggtcctcctggtcct
cctgggcctccggggtcacctggacctcaggggccacatggtttacctggtgcccgtggc
attcctggcatgattggaggacctggacagattggaaacacaggacttaaaggaaaaaga
ggaccaaagggagaaagaggagatccaggtaaaccccacccaggactaccgggacctcca
ggaataccaggtcctcctggcattgatggagtggctcgggacggcaggcccggtgagaga
ggacctgaaggagcagccggagaggctggttaccccggtaaggcgggtccgcaaggtctc
ccaggcttttgcgaggctgcgatgtgtctggctgcgtcagcgtacacctccccaagacta
caggaggcgggaacgatcaaaggaccaaatgtttag
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